Gene CPF_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1861 
Symbol 
ID4201099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2096532 
End bp2097179 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content25% 
IMG OID638082731 
Producthypothetical protein 
Protein accessionYP_696295 
Protein GI110798976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000868741 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGTT TTAATATAGA AAAACAATCA ATGTGGAAAT GCATAACTAA GAATAAATTA 
ATTTGTAATG AAAGTGATAC TTTAGCAATA ATACTACCAG GCCTTGGGTA CACCCTAGAT
AAAGCACTTT TAGATTATTC TAAACAGCTT ATTTTAGATT TTAAATTTGA TTGTTTAGGA
ATAGAATATG GATTTCAAGT TAGTAGAGAA GCTTTTAATA GACAGGATGA AAATGATATA
AGAGAATTAT TACTTGAAAC TCTAGATATT ATTTTTAGTG CCTTAGAACT TAGAAGAGGA
AAATATAAGA GAATTATTCT TATAGGTAAA AGTTTAGGTA CAGTATTACA AAGTAGAATA
GATAAAGAAA TTAAAGAAAA TTATGATATT CATATTAAAA ATATTTATTT AACTCCTATA
AATGAGACCT TTAAAGAGAA TTTAGGTAAA GAAGGATTAA TAATAACTGG TACTAAGGAT
ACTTTAATAT CTTCAGAGAA TTTGGAAAAA ATAAAATCTG AGGGATTAAG AGTATTAGAA
ATAGAGGATG CTGGCCATTC ATTATGTATA AAAGGAAATG TATTAAGGAG CATTAAAGCT
TTAGAAATAA TAATTGAAAA TATAAAAGAT TATCTTGAAA GAATGTAA
 
Protein sequence
MNSFNIEKQS MWKCITKNKL ICNESDTLAI ILPGLGYTLD KALLDYSKQL ILDFKFDCLG 
IEYGFQVSRE AFNRQDENDI RELLLETLDI IFSALELRRG KYKRIILIGK SLGTVLQSRI
DKEIKENYDI HIKNIYLTPI NETFKENLGK EGLIITGTKD TLISSENLEK IKSEGLRVLE
IEDAGHSLCI KGNVLRSIKA LEIIIENIKD YLERM