Gene CPF_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1845 
Symbol 
ID4202643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2082544 
End bp2083731 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content29% 
IMG OID638082715 
ProductFmtC domain-containing protein 
Protein accessionYP_696279 
Protein GI110799546 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000138078 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCT TTGCAAGCTT TATACATAAA TTTAACATAC ATTTTAGTAA GAATTATAAG 
TACTATGTAG ACTTCTTCCA TAGCACAAAG GGGTATTTAA GAATAGCATT ATTCACTTAT
ATAGCCTTTA TAATATTTGT GATAATATGG TATTTAACAA TGCCTAAAAT AGAAGATGAC
GAAAGGTATA TGGATGCTGA TTTAGAAAAG GTATCAAAAT TCTTTAAAGA AATAGATTAT
GGAACAATAT TCTCCCATTT AGTTTATTTA AAGGATAAAA AGGTCTTTTG GGCTAATGAA
GGAGAGTCCT TAATAATGTA TAGCAAGTAC AAAGATAAGA TAATAGTTTT AGGAGATCCT
ATAGCCACTA AGGAAAATCT ATATAGTTGT ATAGAAGAGT TTCAAGCTTT TACAAATTTA
TATGGATATG ATGTTGTTTT TTATGAAATA GAAGAAAAAA ACTTTTCTAC CTATCATGAT
GCAGGTTATT ATTTCTTTAA GTTAGGAGAA GAGGCAAGAA TAGATTTAGA AGAATTTAAT
TTGATTGGTT CTAAAAAGAG TGCCTTTAGA AATACCTTAA GAAGAGTTGA AAGGGAAGGA
TATAGTTTTA GTATTATAGA GCCTCCTTTT AATAATGAGG TAGTAAGTCA ATTGAAGGAA
ATATCCGATA AATGGTTAGG TGACAGAAAG GAGAAGGGAT TTTCTTTAGG ATGGTTTAGT
GAGGATTATA TACAAAGATC GCCTATAGCT ATTTTAAAAA ATGAAGAAGA AAATAAGATT
ATGGGCTTTG TAACAATAAT GGATGCTAAT GATGGAGGGG AGACAGTAGC AATAGATTTA
ATGAGAATAG ATAAAAATGC TCCTAATGCC TCTATGGATT ACTTAATGCT TAATTTATTC
TTAACATTTA AAGAAAAAGG ATATAAATAT TTTAGCTTAG GAGAAGCACC ATTATCCAAT
GTAGGATTTA ACACTCATTC ACATTTACAA GAAAAGCTTG CAAGGTTAGT TTATAATAGT
GGTAATATAT TCTATAGTTT TGATGGACTA AGAAGATATA AGTCAAAGTT TTCTCCAATT
TGGCAGCCTA GATATTTAGC ATACCCTAAG TTTATGTCCT TACCAGAGGT GTTTATTAAC
TTATGTTTAT TAATAGCTAA TTCAAAGGAA AGAGTAGAGA AAAAATAA
 
Protein sequence
MIIFASFIHK FNIHFSKNYK YYVDFFHSTK GYLRIALFTY IAFIIFVIIW YLTMPKIEDD 
ERYMDADLEK VSKFFKEIDY GTIFSHLVYL KDKKVFWANE GESLIMYSKY KDKIIVLGDP
IATKENLYSC IEEFQAFTNL YGYDVVFYEI EEKNFSTYHD AGYYFFKLGE EARIDLEEFN
LIGSKKSAFR NTLRRVEREG YSFSIIEPPF NNEVVSQLKE ISDKWLGDRK EKGFSLGWFS
EDYIQRSPIA ILKNEEENKI MGFVTIMDAN DGGETVAIDL MRIDKNAPNA SMDYLMLNLF
LTFKEKGYKY FSLGEAPLSN VGFNTHSHLQ EKLARLVYNS GNIFYSFDGL RRYKSKFSPI
WQPRYLAYPK FMSLPEVFIN LCLLIANSKE RVEKK