Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1845 |
Symbol | |
ID | 4202643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2082544 |
End bp | 2083731 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082715 |
Product | FmtC domain-containing protein |
Protein accession | YP_696279 |
Protein GI | 110799546 |
COG category | [S] Function unknown |
COG ID | [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000138078 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATCT TTGCAAGCTT TATACATAAA TTTAACATAC ATTTTAGTAA GAATTATAAG TACTATGTAG ACTTCTTCCA TAGCACAAAG GGGTATTTAA GAATAGCATT ATTCACTTAT ATAGCCTTTA TAATATTTGT GATAATATGG TATTTAACAA TGCCTAAAAT AGAAGATGAC GAAAGGTATA TGGATGCTGA TTTAGAAAAG GTATCAAAAT TCTTTAAAGA AATAGATTAT GGAACAATAT TCTCCCATTT AGTTTATTTA AAGGATAAAA AGGTCTTTTG GGCTAATGAA GGAGAGTCCT TAATAATGTA TAGCAAGTAC AAAGATAAGA TAATAGTTTT AGGAGATCCT ATAGCCACTA AGGAAAATCT ATATAGTTGT ATAGAAGAGT TTCAAGCTTT TACAAATTTA TATGGATATG ATGTTGTTTT TTATGAAATA GAAGAAAAAA ACTTTTCTAC CTATCATGAT GCAGGTTATT ATTTCTTTAA GTTAGGAGAA GAGGCAAGAA TAGATTTAGA AGAATTTAAT TTGATTGGTT CTAAAAAGAG TGCCTTTAGA AATACCTTAA GAAGAGTTGA AAGGGAAGGA TATAGTTTTA GTATTATAGA GCCTCCTTTT AATAATGAGG TAGTAAGTCA ATTGAAGGAA ATATCCGATA AATGGTTAGG TGACAGAAAG GAGAAGGGAT TTTCTTTAGG ATGGTTTAGT GAGGATTATA TACAAAGATC GCCTATAGCT ATTTTAAAAA ATGAAGAAGA AAATAAGATT ATGGGCTTTG TAACAATAAT GGATGCTAAT GATGGAGGGG AGACAGTAGC AATAGATTTA ATGAGAATAG ATAAAAATGC TCCTAATGCC TCTATGGATT ACTTAATGCT TAATTTATTC TTAACATTTA AAGAAAAAGG ATATAAATAT TTTAGCTTAG GAGAAGCACC ATTATCCAAT GTAGGATTTA ACACTCATTC ACATTTACAA GAAAAGCTTG CAAGGTTAGT TTATAATAGT GGTAATATAT TCTATAGTTT TGATGGACTA AGAAGATATA AGTCAAAGTT TTCTCCAATT TGGCAGCCTA GATATTTAGC ATACCCTAAG TTTATGTCCT TACCAGAGGT GTTTATTAAC TTATGTTTAT TAATAGCTAA TTCAAAGGAA AGAGTAGAGA AAAAATAA
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Protein sequence | MIIFASFIHK FNIHFSKNYK YYVDFFHSTK GYLRIALFTY IAFIIFVIIW YLTMPKIEDD ERYMDADLEK VSKFFKEIDY GTIFSHLVYL KDKKVFWANE GESLIMYSKY KDKIIVLGDP IATKENLYSC IEEFQAFTNL YGYDVVFYEI EEKNFSTYHD AGYYFFKLGE EARIDLEEFN LIGSKKSAFR NTLRRVEREG YSFSIIEPPF NNEVVSQLKE ISDKWLGDRK EKGFSLGWFS EDYIQRSPIA ILKNEEENKI MGFVTIMDAN DGGETVAIDL MRIDKNAPNA SMDYLMLNLF LTFKEKGYKY FSLGEAPLSN VGFNTHSHLQ EKLARLVYNS GNIFYSFDGL RRYKSKFSPI WQPRYLAYPK FMSLPEVFIN LCLLIANSKE RVEKK
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