Gene CPF_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1843 
Symbol 
ID4201020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2080745 
End bp2081236 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content28% 
IMG OID638082713 
Producthypothetical protein 
Protein accessionYP_696277 
Protein GI110801160 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0266883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTAA TAATAAACTC AATATATGCA TTTTTTAGTT CTTTAGGTTT TGGAATAATA 
TTTAATATAA AAGGTAAAAA CTTATTTTTC TCTTCCCTAT GCGGCGGTTT AGGATGGTTT
GTTTATCTTT TTTCCTCAAG TTTTATTAGC ACAAATGAAA GCTTTAATTA TTTTTTAGCT
GCTATTTTCA TAGCCCTATT CTCTGAGATT TCAGCTAGGG TATTAAAAGC TCCTGTATTA
GTATTTTTAG TTTGTGGAAT AATTCCTCTA GTTCCTGGAG GAGGCATGTT CTATACAATG
CTAGAAACCT TAAAAGGAAA TATAGATAAG GCTTTATCCT TAGGATGCAA TACACTAATG
TTAGCTGGTT CCATAGCTAC TGGAATTGTT TTAGTTTCAT CCTTTACTAA GCTATATTTT
TCTATAAAAA GACTTATTAA TAGTAAAATT AAAAGTACTG AAAATAATAA CTATTTAAAT
AAAAGTATTT AG
 
Protein sequence
MNLIINSIYA FFSSLGFGII FNIKGKNLFF SSLCGGLGWF VYLFSSSFIS TNESFNYFLA 
AIFIALFSEI SARVLKAPVL VFLVCGIIPL VPGGGMFYTM LETLKGNIDK ALSLGCNTLM
LAGSIATGIV LVSSFTKLYF SIKRLINSKI KSTENNNYLN KSI