Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1843 |
Symbol | |
ID | 4201020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 2080745 |
End bp | 2081236 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082713 |
Product | hypothetical protein |
Protein accession | YP_696277 |
Protein GI | 110801160 |
COG category | [S] Function unknown |
COG ID | [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0266883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTAA TAATAAACTC AATATATGCA TTTTTTAGTT CTTTAGGTTT TGGAATAATA TTTAATATAA AAGGTAAAAA CTTATTTTTC TCTTCCCTAT GCGGCGGTTT AGGATGGTTT GTTTATCTTT TTTCCTCAAG TTTTATTAGC ACAAATGAAA GCTTTAATTA TTTTTTAGCT GCTATTTTCA TAGCCCTATT CTCTGAGATT TCAGCTAGGG TATTAAAAGC TCCTGTATTA GTATTTTTAG TTTGTGGAAT AATTCCTCTA GTTCCTGGAG GAGGCATGTT CTATACAATG CTAGAAACCT TAAAAGGAAA TATAGATAAG GCTTTATCCT TAGGATGCAA TACACTAATG TTAGCTGGTT CCATAGCTAC TGGAATTGTT TTAGTTTCAT CCTTTACTAA GCTATATTTT TCTATAAAAA GACTTATTAA TAGTAAAATT AAAAGTACTG AAAATAATAA CTATTTAAAT AAAAGTATTT AG
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Protein sequence | MNLIINSIYA FFSSLGFGII FNIKGKNLFF SSLCGGLGWF VYLFSSSFIS TNESFNYFLA AIFIALFSEI SARVLKAPVL VFLVCGIIPL VPGGGMFYTM LETLKGNIDK ALSLGCNTLM LAGSIATGIV LVSSFTKLYF SIKRLINSKI KSTENNNYLN KSI
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