Gene CPF_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1832 
Symbol 
ID4201288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2066325 
End bp2067437 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content36% 
IMG OID638082702 
ProductBmp family lipoprotein 
Protein accessionYP_696266 
Protein GI110799032 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0726704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AATTTCTTTC TGCTGTGTTA GCAGTACTTA CAACAGCTAC TTTACTTGCA 
GGGTGTGGAG GTTCAAGTGA TGGACAAGCA TCATCAGGTG ATACTGGTTC TAAGGGAGAC 
AAAATGAAGG TTGGAATGGT TACTGATGCC GGAACAATAG ATGATAAGTC ATTTAACCAA 
GGAACTTGGG AAGGAATACA AAAAGCTGAA AAAGACTTAG GAGTAGAAGC TAAGTATTTA 
AAACCAAGTG GAACAACAGA AGCTGATTAC TTAAAAGAAA TAGGAAATCT TTACGATGCA 
GGATTCAAAT TTATAGTAAC TCCAGGATTT AAATTTGAGA CAGCTATATA TAAAGGACAA 
GAAAAATATA AAGATGCTAA ATTTGTATTA TTAGATGGTG CTCCTCATTC AGGTGCTAAG 
GATGCAAAGC CAGAAGTAGG TCCGAATACG GTTTCAATAT TCTTTGCTGA AGAGCAAGCA 
GGTTTTATGG CAGGTGTTGC TACAGCATTA CAACTTAAAG AAGGTCAATT AGGATTTATA 
GGTGGTATGG AAATTCCACC AGTACAAAAA TTTAACTGGG GATTCCAACA AGGGGTAGCC 
TTTGCTAATG AAAAATTAGG AACTCACATG TCTCTTGAAG CAAAAAATGT TATATATCAA 
GGATCATTTG ATGACTCAGC TGCAGGTGGA CAAATAGCTG CTCAAATGTA TGACAATGGA 
GTAAAAGCTA TATTCTGTGC TGCTGGTGGT GTTGGTGTAG GAGCTATACA AGAAGCTAAA 
AATAGAGCTG CTTCAGGAAA AGAAGCTTGG ATAATAGGTG TTGACGTTGA CCAATACGAC 
GATGGTATAT ATGAAGGAGA TAAATCTGTA ATACTTACTT CAGCAGTTAA GAGAATAGAT 
CACGCTTCTT ATGACATGAT AAAGAAAGAA TTAGATGGAA CTTTCCCAGG TGGACAAACT 
TTATTATATG ATGCAAAAAA TGATGGTGTA GGTTTACCTG ATAAGAATCC AAACTTAAGT 
GAAGAAACTA TGACTGAAGT AAATAAAGTA TTTGAACAGT TAAAAAATGG AGAAATAAAA 
GTTTCTAACG AGCAAGGAGA CTTAATAAAT TAA
 
Protein sequence
MKKKFLSAVL AVLTTATLLA GCGGSSDGQA SSGDTGSKGD KMKVGMVTDA GTIDDKSFNQ 
GTWEGIQKAE KDLGVEAKYL KPSGTTEADY LKEIGNLYDA GFKFIVTPGF KFETAIYKGQ 
EKYKDAKFVL LDGAPHSGAK DAKPEVGPNT VSIFFAEEQA GFMAGVATAL QLKEGQLGFI 
GGMEIPPVQK FNWGFQQGVA FANEKLGTHM SLEAKNVIYQ GSFDDSAAGG QIAAQMYDNG 
VKAIFCAAGG VGVGAIQEAK NRAASGKEAW IIGVDVDQYD DGIYEGDKSV ILTSAVKRID 
HASYDMIKKE LDGTFPGGQT LLYDAKNDGV GLPDKNPNLS EETMTEVNKV FEQLKNGEIK 
VSNEQGDLIN