Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1831 |
Symbol | |
ID | 4202616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2064649 |
End bp | 2066184 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082701 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_696265 |
Protein GI | 110799286 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.567476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATATG TAGTAGAAAT GCTTAATATC CGTAAAGAAT TTCCTGGTAT AGTAGCAAAT GATAATATAA CTTTGCAACT TAGAAAAGGA GAGATACATG CTTTACTTGG AGAAAATGGA GCTGGTAAAT CTACTTTAAT GGGAATTCTT TTTGGAATGA ACCAACCAGA TAAAGGGGTT ATAAAGGTTA GAGGTAAAGA AGTGAAAATT ACTAATCCCA ATGTTGCAAA TGATCTTGGA ATAGGAATGG TACACCAACA TTTTAAATTA GTTGAAAATT TTACAGTAAC TCAAAATATA GTTTTAGGAT GCGAGCCTAA GATTCTTTTT GGATTAGGAA TGGATTTAAA CAAGGCAGCT AAAAGAATTG AAGAATTATC AAAGCAATAT GGATTAAATG TTGACCCTAA TGCAAAGATT GAAAATATAT CTGTTGGTAT GCAACAAAGG GTTGAAATAT TAAAAATGCT TTATAGAGAT GCTGACGTTC TTATATTAGA TGAACCTACT GCAGTTTTAA CCCCTCAAGA AATTGATGAA CTTATAAAAA TAATGAAAAA TCTTATAAAT GAGGGAAAAT CAATAATAAT TATAACTCAT AAACTTAAGG AGATAAAAGC TGCTGCAGAT AGATGTACAG TTATAAGAAG AGGTAGATAC ATTGGTACTG TAGATGTAAA AACTACTAGT GAAGCTGAAA TGGCTAAAAT GATGGTAGGA AGAGAAGTAT CCTTTAAAGT TAATAAAAAG CCTGCTAAGC CTGGTGATGT AGTATTAGAT ATTAAAAATC TTTCAGTTAA GAATAATAAG AAAGTATTAG GATTAAAGGA CTTTTCTATT GATGTTAGAG CAGGAGAAAT AGTAGGTATA GCAGGGGTAG AAGGTAATGG TCAAAGTGAA CTTATTGAGG CTATTACAGG ACTTAGAAAA AGTGAAAGTG GAACTATAAA CTTCAAAAAC AAGGATATAA CTAGAGAATC TATAAGAAAT AGAATAAACT CAGGTATTGC ACATATTCCA GAAGATAGAC ATAAGAGAGG ACTAGTTTTA GATTACACAA TTGAAGAGAA TATGGTTCTA GAAGTATATG ATAAAAAACC ATTTTCAAAT AAAGGTTTAT TAAACAAAAA AGAAATAAAA AAATATGCAG AAAAAATAAT AGATGAATTT GATGTAAGAT CTGGAGAAGG GGCTGAATCT ATAGCAAGAT CTCTTTCAGG AGGAAATCAG CAAAAAGCAA TTATAGGCCG TGAAATAGAA TTAAATCCAG AACTTTTAAT AGCAGCACAA CCTACTAGAG GACTTGATGT AGGATCTATA GAGTATATTC ATAAAAGACT TGTAGAGCAA AGAGATAGCG GAAAAGCAGT GCTTTTAGTT TCTCTTGAAT TAGATGAAAT ATTAAATGTT TCAGATAGAA TTGCAATAAT AAATAACGGA GAACTTATAG GTGTTGTAAA TGCAGATGAA ACTAATGAAA ATGAAGTAGG TCTTATGATG GCTGGTATAA AAGGAGGAGA AAAGCATGAA GTTTAA
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Protein sequence | MEYVVEMLNI RKEFPGIVAN DNITLQLRKG EIHALLGENG AGKSTLMGIL FGMNQPDKGV IKVRGKEVKI TNPNVANDLG IGMVHQHFKL VENFTVTQNI VLGCEPKILF GLGMDLNKAA KRIEELSKQY GLNVDPNAKI ENISVGMQQR VEILKMLYRD ADVLILDEPT AVLTPQEIDE LIKIMKNLIN EGKSIIIITH KLKEIKAAAD RCTVIRRGRY IGTVDVKTTS EAEMAKMMVG REVSFKVNKK PAKPGDVVLD IKNLSVKNNK KVLGLKDFSI DVRAGEIVGI AGVEGNGQSE LIEAITGLRK SESGTINFKN KDITRESIRN RINSGIAHIP EDRHKRGLVL DYTIEENMVL EVYDKKPFSN KGLLNKKEIK KYAEKIIDEF DVRSGEGAES IARSLSGGNQ QKAIIGREIE LNPELLIAAQ PTRGLDVGSI EYIHKRLVEQ RDSGKAVLLV SLELDEILNV SDRIAIINNG ELIGVVNADE TNENEVGLMM AGIKGGEKHE V
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