Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1821 |
Symbol | |
ID | 4203467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2053123 |
End bp | 2053953 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082691 |
Product | HAD family hydrolase |
Protein accession | YP_696255 |
Protein GI | 110801386 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0131582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATA AATTAGTTTG TATAGATATG GATGGTACGC TTTTAGATTC TCATCATAAA GTTAGTGAAA GAAATAAAGA GGCTTTAAAG AAAGCCATTG AAAAAGGAGT ACATATTGCC ATATCAACAG GAAGGGTTTT TCCGTCAGCT AGAATATATG GGAATATAAT AGGAGTAAAT GCACCATTAA TTTGTTCAAA TGGTTCATAT ATAAAGGATA AAAATACTGA TGAGGTAATA TTTAAATCTA CACTAGACAG GGAAACTTAC TTTAAAATAT GTGATATTAT AAATAAATAT AAGTTTTTAG CTTATGTAGA CTCTACAGAT GGACTAATAG CAGATACAGA TATTCCAGAG GATGATAGTC ATAGGCTTAT GAATAGCTGG GTAGATGAGA AAGAAAAAAT AAAATTCTAC AATTGCGATG ATTTAAGAGA TGCTTATGAT GAACATGGAG AAGATATATT AAAGTTCATA ATAATAAAAC AAGAAGGTGG ACCTAATATA GAAGAAGCTA AGGAGGAATT TGAAGCTTTA GAAGGAGTAG ATTTAGTTTA TGCTTCTTGG GGTGGATGTA TAGAGATCAT GAAAAAAGGA ACTTCAAAGG GAAGTGCAGT TAAAGCCCTT GCAGATAAAT TAGGAATAAG CCTAGAAGAG GTGATATGCA TTGGTGATAG TGGAAATGAT GTATCTATGC TAGAAGAGGC AGGATTATCT GTAGTAATGG GAAATGCACC AGACTTTATT AAGGAATATG GAGATTATAT AACAGATACA AATGAAAATG ATGGTGTTGC TAAGGCTATA GAGAAGTTTA TATTGGAGTA A
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Protein sequence | MNYKLVCIDM DGTLLDSHHK VSERNKEALK KAIEKGVHIA ISTGRVFPSA RIYGNIIGVN APLICSNGSY IKDKNTDEVI FKSTLDRETY FKICDIINKY KFLAYVDSTD GLIADTDIPE DDSHRLMNSW VDEKEKIKFY NCDDLRDAYD EHGEDILKFI IIKQEGGPNI EEAKEEFEAL EGVDLVYASW GGCIEIMKKG TSKGSAVKAL ADKLGISLEE VICIGDSGND VSMLEEAGLS VVMGNAPDFI KEYGDYITDT NENDGVAKAI EKFILE
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