Gene CPF_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1808 
Symbol 
ID4203472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2041602 
End bp2042552 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content27% 
IMG OID638082678 
Producthypothetical protein 
Protein accessionYP_696242 
Protein GI110801391 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0309492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTA TAGGTGTTAG AACTTGGAAA ACAGGAATAG GCGCTGTAAT AGCTATGATA 
ATAGCAAAGG AATTAGGGCT AAGTTACTGG GTTTCAGCAG GAATTATAAC CATACTTAGC
ATACAGAGTA CAAAAAGAGA ATCATTAAAG ATAGCTATAA AGAGAATAGA ATCTGTTATT
ATAGCCTTAA TAGTGTCTTC AGTTTTATTC TTAGCATTAG GGTTTAACTC AGTTGTTTTT
GGATTATATC TTTTAGTTTT TATACCTTTA ACAGTAAAAC TAAAAGTGAC AGATGGAATT
GTTGTAAGTT CTGTTTTAGT AACTCATTTA TTAGTTGAGA AACAGGTGAA TTCATATTGG
ATAATAAATG AACTAGGCCT TATGCTAGTT GGGGTTTTGG TTGCATTAAT ATTAAATAGT
TATATGCCTA AGAATGAGGA AAAGATAAAA GAAGACATAG ATTATATATC TGAAAAAATA
AAAGAGATAT TTATGGATAT GGCATATTCT TTAAGAACAC ATAGTGTTTC AATAAAGGAA
CAAAGACTTT TTGATGAACT TGAAAATAGA ATAGAGTTAG CTAAAAAAAG AGCCAATGAT
AATTTTAATA ACTATTTGTT TTCAGATGTT AAGTACTATG TGCATTACAT AGATATGAGA
GAAGTTCAAT TTCAAATGTT AAAGTATATG AGAGAACACT TTTCAAGAAT ATCTATTACT
GTAAAACAGA CTGAACTAGT TGCTAATTTT ACAGAAGAGG TAGCCTCTGT AATAGGTAAA
GAAGTTAATG TAAATATTCT TATTAATAGA TTAAATAGAT TAAAAAAAGA GTTAAGTGAA
CAAGAACTTC CAGTAACCAG AGAAGAGTTT GAAAATAGAG CTATGTTATT TCAATTTATT
AATGATTTAG AGATTTTTAT AAAAACAAAA AATCAATGTT ATATAAAATA A
 
Protein sequence
MRFIGVRTWK TGIGAVIAMI IAKELGLSYW VSAGIITILS IQSTKRESLK IAIKRIESVI 
IALIVSSVLF LALGFNSVVF GLYLLVFIPL TVKLKVTDGI VVSSVLVTHL LVEKQVNSYW
IINELGLMLV GVLVALILNS YMPKNEEKIK EDIDYISEKI KEIFMDMAYS LRTHSVSIKE
QRLFDELENR IELAKKRAND NFNNYLFSDV KYYVHYIDMR EVQFQMLKYM REHFSRISIT
VKQTELVANF TEEVASVIGK EVNVNILINR LNRLKKELSE QELPVTREEF ENRAMLFQFI
NDLEIFIKTK NQCYIK