Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1808 |
Symbol | |
ID | 4203472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2041602 |
End bp | 2042552 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082678 |
Product | hypothetical protein |
Protein accession | YP_696242 |
Protein GI | 110801391 |
COG category | [S] Function unknown |
COG ID | [COG4129] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0309492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTTA TAGGTGTTAG AACTTGGAAA ACAGGAATAG GCGCTGTAAT AGCTATGATA ATAGCAAAGG AATTAGGGCT AAGTTACTGG GTTTCAGCAG GAATTATAAC CATACTTAGC ATACAGAGTA CAAAAAGAGA ATCATTAAAG ATAGCTATAA AGAGAATAGA ATCTGTTATT ATAGCCTTAA TAGTGTCTTC AGTTTTATTC TTAGCATTAG GGTTTAACTC AGTTGTTTTT GGATTATATC TTTTAGTTTT TATACCTTTA ACAGTAAAAC TAAAAGTGAC AGATGGAATT GTTGTAAGTT CTGTTTTAGT AACTCATTTA TTAGTTGAGA AACAGGTGAA TTCATATTGG ATAATAAATG AACTAGGCCT TATGCTAGTT GGGGTTTTGG TTGCATTAAT ATTAAATAGT TATATGCCTA AGAATGAGGA AAAGATAAAA GAAGACATAG ATTATATATC TGAAAAAATA AAAGAGATAT TTATGGATAT GGCATATTCT TTAAGAACAC ATAGTGTTTC AATAAAGGAA CAAAGACTTT TTGATGAACT TGAAAATAGA ATAGAGTTAG CTAAAAAAAG AGCCAATGAT AATTTTAATA ACTATTTGTT TTCAGATGTT AAGTACTATG TGCATTACAT AGATATGAGA GAAGTTCAAT TTCAAATGTT AAAGTATATG AGAGAACACT TTTCAAGAAT ATCTATTACT GTAAAACAGA CTGAACTAGT TGCTAATTTT ACAGAAGAGG TAGCCTCTGT AATAGGTAAA GAAGTTAATG TAAATATTCT TATTAATAGA TTAAATAGAT TAAAAAAAGA GTTAAGTGAA CAAGAACTTC CAGTAACCAG AGAAGAGTTT GAAAATAGAG CTATGTTATT TCAATTTATT AATGATTTAG AGATTTTTAT AAAAACAAAA AATCAATGTT ATATAAAATA A
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Protein sequence | MRFIGVRTWK TGIGAVIAMI IAKELGLSYW VSAGIITILS IQSTKRESLK IAIKRIESVI IALIVSSVLF LALGFNSVVF GLYLLVFIPL TVKLKVTDGI VVSSVLVTHL LVEKQVNSYW IINELGLMLV GVLVALILNS YMPKNEEKIK EDIDYISEKI KEIFMDMAYS LRTHSVSIKE QRLFDELENR IELAKKRAND NFNNYLFSDV KYYVHYIDMR EVQFQMLKYM REHFSRISIT VKQTELVANF TEEVASVIGK EVNVNILINR LNRLKKELSE QELPVTREEF ENRAMLFQFI NDLEIFIKTK NQCYIK
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