Gene CPF_1803 details

Gene Information

• Locus tag: CPF_1803
• Symbol: pulA
• ID: 4201252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2035132
• End bp: 2037099
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638082673
• Product: pullulanase, type I
• Protein accession: YP_696237
• Protein GI: 110799982
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases
• TIGRFAM ID: [TIGR02104] pullulanase, type I

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.248563
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAGAA AGTTTAATTC TAAAGAGTTT AATGATAAGT ATTATTATGA TGGAGAACTT 
GGAGCTATTT ATAATAAAGA GGAGACTATT TTTAGGGTAT GGTCACCAGA AGCTAAGAGT 
TTAGAATTAT TACTTTATAG AGATGGGAAT AAAGAGAGTT TAATAGAAAG AGATTTGCTT 
CATAAAAAAA GTAATGGACT TTGGGAATTA GTAAAAAAGG GAGATTTAAA TGGAGTTTAT 
TATAAGTGCC ATATTGTAGG AGAAGATTTT GAGCATGATT TTGTTGATCC TTACTGCAAA 
GCCTTAGGAG TTAATGGGTA TAGAGCTATG GTTATTGACT TGAAGAAAAC TAATCCTAAG 
GGATGGGAAA ATGAAAAGAA ACCATCACTT GAAAATCCCT TAGATTCAAT TTTATATGAA 
ATGCATATAA GAGATTTTTC GATTGATAAG AGTTCAGGGG TTTCTTTAGA AAATAGAGGA 
AAGTTTTTAG GAATAGTTGA AGAAAATACA AAAGTTCCTG GTACAGAAGT AAAAACAACC 
TTAGATCATT TAAAGGAATT AGGAATAACC CATGTACATC TTTTACCTTC TTTTGATTTT 
GGAACAGTTG ATGAGGAGAG ATTAGATGAA GAGCAGTATA ATTGGGGATA TGACCCTGTA 
AATTATAATG TACCAGAAGG ATCATATTCT AAAAATCCAT ATAAAGGTGA AGTTAGAATT 
AAAGAGTTTA AGGAAATGGT ACTTAAACTT CATAGAGCAG GAATAAGAGT TATAATGGAT 
GTTGTGTATA ATCACACTTA TTCAGGAGAA AACTCTAATT TAAATTTATC TTACCCAGGA 
TATTATCATA GACAAGATGA CTTTGGGAAT TTTTCTAATG GTTCTGGATG TGGTAATGAA 
TTAGCATCAG AAAGACTTAT GGTAAGAAAA TATATGGTTG ATTCATTAAA GTATTGGGCA 
AAAGAATATC ACATAGATGG ATTTAGATTT GATTTAATGG CATTACATGA TATTGAAACC 
TTAAAGGAAA TAAGAGAAGA ATTAAATAAA ATAGATCCTT CAATATTAAT ATATGGAGAA 
GGATGGAATG GAGGAGACTC TCCACTGCCT AAAGAAGAAG CTTGTTTTAA ATGTAATATA 
GGTAAATTTG ATAAATTACA AATAGCAGCT TTTAGTGATG ATATGAGAGA TGGGATAAAA 
GGATATGTAG CACATCTTAA AGAAGGAGGC TTCGTAAATG GAGGAGAAGA CTTTGAAGAG 
AGTATAAAGT TTGGAATAGT AGCTTCTACT TATCATGAAG GAGTAGATTA TAATAAAGTA 
AATTATTCAG ATTCTCCTTG GGCAAATGAA CCTTATCAGA CAGTAAATTA TTGCTCAGCC 
CATGATAATA ATACATTACA CGATAAGCTT AAAATTGTAT GTGAAAATGC TTCTGAAGAA 
GAGATAATAG AAATGAATAA GTTAAGTGCT GCTATTTTCT TAACATCTCA AGGAATACCC 
TTTATTCATT CAGGAGAGGA GTTTTTAAGA ACTAAGACTA ATGAAAAAGG AGAATTTATT 
GAAAATAGTT ATAATTCTAA TGACTTTGTA AACAAGATTG ATTGGACTAG AAAAGTAAAG 
TATATGGATT TATTTAAATA CTATAAGGGA TTAATTGAAT TAAGAAAGGA ATATCCTTTA 
TTTAGGTTAG AAAGTAACAA AGAAATAAGA GAAAAAATTT CATTTATAGA GAGTGAGTTA 
GGAATAAAGA AAAAGGGTAT AGTTGCTTAT AGATTAAAAG ATCATAATAA TGAATTCATA 
GTAGTTTTTA ATAGTAATAA TAATGAAGTT AAAATAAACC TTCCTAAGGG TCTTTGGGGA 
GTTATGGTTA ATAATAAATT TTCAGGAAAA GAAATAAGGG ATGAAGCTAG AGATTTTTAT 
GATATAATAA GAAAGTCAGC ATGTGTTCTT AAAAAATTAA GTGATTAA 

 

Protein sequence

MRRKFNSKEF NDKYYYDGEL GAIYNKEETI FRVWSPEAKS LELLLYRDGN KESLIERDLL 
HKKSNGLWEL VKKGDLNGVY YKCHIVGEDF EHDFVDPYCK ALGVNGYRAM VIDLKKTNPK 
GWENEKKPSL ENPLDSILYE MHIRDFSIDK SSGVSLENRG KFLGIVEENT KVPGTEVKTT 
LDHLKELGIT HVHLLPSFDF GTVDEERLDE EQYNWGYDPV NYNVPEGSYS KNPYKGEVRI 
KEFKEMVLKL HRAGIRVIMD VVYNHTYSGE NSNLNLSYPG YYHRQDDFGN FSNGSGCGNE 
LASERLMVRK YMVDSLKYWA KEYHIDGFRF DLMALHDIET LKEIREELNK IDPSILIYGE 
GWNGGDSPLP KEEACFKCNI GKFDKLQIAA FSDDMRDGIK GYVAHLKEGG FVNGGEDFEE 
SIKFGIVAST YHEGVDYNKV NYSDSPWANE PYQTVNYCSA HDNNTLHDKL KIVCENASEE 
EIIEMNKLSA AIFLTSQGIP FIHSGEEFLR TKTNEKGEFI ENSYNSNDFV NKIDWTRKVK 
YMDLFKYYKG LIELRKEYPL FRLESNKEIR EKISFIESEL GIKKKGIVAY RLKDHNNEFI 
VVFNSNNNEV KINLPKGLWG VMVNNKFSGK EIRDEARDFY DIIRKSACVL KKLSD