| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1802 |
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| Symbol | |
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| ID | 4201961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2033922 |
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| End bp | 2034920 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082672 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_696236 |
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| Protein GI | 110800487 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.12203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTG TGAGTAACAA AGTAAGAAAT GGAAAACATA ATAAGTATTT AAAAAGAAGA
ATAGCAGTTG CTGTAGCTGG TATTGTAGTA ATTGCAGGAG TAGGTTTTGG AATTAAATCA
CTAGTTAGCA ATAAAGCTAA TAAGGAGGCT TTAGCATCAG CTAAGGAAGA GGAAACTAAA
AAAGAAGAGG AAAAACCAAA ACCAACAGAC ATAATGCCAA ATGGTAATAT AATTTATGCT
GCAGATTCCT ATGCAGTTAG TGCAGATGAA GTTGAAAAAA TGCTTGAAGG AAAAGCTTCA
AATAATGATA AAGAAATATT TTTAACTTTT GATGATGGTC CAAGTGAAAA TACAAGGGAA
ATATTAAAGA TTTTAAAGGA AGAAGATGTA CATGCTACAT TTTTTGATAT AGGATCTGCC
TTAAAGGATA ATAAAGAAAA TCAAGAGTTA TTAAAACAAG AAATTGATCA AGGAAATGCA
GTAGCTGGTC ATAGTTTTTC ACATAATTAT AAAACATTGT ATCCAGGAAA TTCAGTTGAT
GTAAATAAAT TTATGAGCGA ATTAAATGAA ACTAATGAAA TAATGAAAAG CGTATTAGGA
AAAAACTTTA ATGCTAGAGT AATTAGAATG CCAGGTGGAT ATATGTCTAG AAGATATTAT
AGAGATCCTA ACTTAAAAGC TTTAGATGAG GCTTTTGCAA AGGATAATAT AGTTAGTATA
GATTGGGATG CAGAAACTGG TGATGCAACT GGAAGACATT ATACAGTAGA GCAATATGTT
GAAAACTCAG CTAAAAATAT TAATACTTTA AATCATGTAA TTTTATTAAT GCATGATGCA
GCAGCTAAGA AAGAAACTGT ACAAGCATTA CCTGCAATAA TTAAATTCTA TAAAGAACAT
GGGTATGCAT TTAAAGTAAT AAAAAATACA CCTGTAGGTG AAAATAATTC TTCAGATGCA
ACTAATAGTT CACAAAATAC TGACAATAAA ACAAAGTAA
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| Protein sequence | MNFVSNKVRN GKHNKYLKRR IAVAVAGIVV IAGVGFGIKS LVSNKANKEA LASAKEEETK
KEEEKPKPTD IMPNGNIIYA ADSYAVSADE VEKMLEGKAS NNDKEIFLTF DDGPSENTRE
ILKILKEEDV HATFFDIGSA LKDNKENQEL LKQEIDQGNA VAGHSFSHNY KTLYPGNSVD
VNKFMSELNE TNEIMKSVLG KNFNARVIRM PGGYMSRRYY RDPNLKALDE AFAKDNIVSI
DWDAETGDAT GRHYTVEQYV ENSAKNINTL NHVILLMHDA AAKKETVQAL PAIIKFYKEH
GYAFKVIKNT PVGENNSSDA TNSSQNTDNK TK
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