Gene CPF_1794 details

Gene Information

• Locus tag: CPF_1794
• Symbol: bioD
• ID: 4202332
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2021762
• End bp: 2022448
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638082666
• Product: dithiobiotin synthetase
• Protein accession: YP_696230
• Protein GI: 110799488
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0132] Dethiobiotin synthetase
• TIGRFAM ID: [TIGR00347] dethiobiotin synthase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.26269
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGG GAGTATATAT AATAGGAACT AGCACTGATA TTGGTAAAAC TTTTATTAGT 
GGACTAATTT TAAAAAAGTT AAGAGAAGAG GGAAGAAATG CAGGGTATTA CAAGGCAGTC 
TTAAGTGGAG CTATAAAAGA CAAAAAGGGG TTAATACCTT TAGATTGTGA AGAAGTTATG 
GAGATTTCTG GACTTAAGGA ATCCTATGAA AATATGGTTT CTTACATACT AGAAAATCCA 
TATTCTCCTC ATTTAGCAAG TGAAGTAGAA GAAGTTTCTA TAAGTATGGA AAAGATAAAA 
AAAGATTATA AGAGTGTTAG AGATAAATAT GACTTTATTC TTTGTGAAGG AAGTGGAGGA 
ATAGTGTGTC CCATAAGTTT TTCAGAGAAA AAGCTTATGC TAGAAGATAT AATTAAAGAG 
TTTAACCTTC CAATAATACT AGTATCTAAT AGTGGATTAG GTGCTATTAA TCACACTGTT 
TTAACAGTAA GTTATTTAAG AAACTTAGGG CTAAAAGTAA AAGGAATAAT ACTTAATAAA 
TTTAATAAAA GTGATATTAT ACACAGAGAT AATAAGAAGA TAATCAAAGA ACTAACAGGA 
GTAAATAATA TTTCAACTGT GCCAAAGATA GAAGATATAG AAAAGTATGA TTTAAATGAA 
CTTAATGAGG TGCTTTATGG AATTTAA 

 

Protein sequence

MEKGVYIIGT STDIGKTFIS GLILKKLREE GRNAGYYKAV LSGAIKDKKG LIPLDCEEVM 
EISGLKESYE NMVSYILENP YSPHLASEVE EVSISMEKIK KDYKSVRDKY DFILCEGSGG 
IVCPISFSEK KLMLEDIIKE FNLPIILVSN SGLGAINHTV LTVSYLRNLG LKVKGIILNK 
FNKSDIIHRD NKKIIKELTG VNNISTVPKI EDIEKYDLNE LNEVLYGI