Gene CPF_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1789 
Symbol 
ID4202206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2016745 
End bp2017776 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content29% 
IMG OID638082661 
Productanaerobic sulfite reductase, A subunit 
Protein accessionYP_696225 
Protein GI110798684 
COG category 
COG ID 
TIGRFAM ID[TIGR02910] sulfite reductase, subunit A 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0801796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATACA AATTAAATTT AAAAGAAGTA AATGATTTAT TTAATGAGCT TAAAAAAGAG 
TATATAATTT ATGCTCCAAA AAGATTTGAG AAGCAAGGAA GATACTCAGA CACAGACATT
ATAAAATATG ATGTTATAAA TAATGTGGAA GAAATAGTAC ATAATGAAAA GTCAACTTAT
CCAGTAAAAG AAGTAATAAC TCCAATTTCT CAAACTTTAT ATTATTTCAT AGAAAATGAG
TTTAGAGAAA GTAAAATGGA TAGTCAAAAG AAGATTCTTA TATTTGCAAG ACCATGTGAT
ATAAATGCAC AAAGAAGACA AGATACTATA TATCTTAAAA ATGGAAATTT TGAAGATACA
TTCTATAAAA GAATGAGAGA TAGAGTTAAG TTTATTTGCA TGGAATGTAC AGAGGGATGG
GATACTTGTT TCTGTACAAC AATGAATAGC AATAAAACTG ATGACTATAG TTTAGCAGTA
AGATTTAATG AGGATAATTT ACTTTTTAAT GTTAAAGAAG AAGAATTTGA TAAATACTTT
GAAGGAAAAG AAGAAGAGGA ATTTGAACTT AAGTTTATTG AAGAAAATAT AGCTAAGGTT
GAATTGCCAG AAATAGAGAG TGTTGAAGTT TTAAATAAAT TAAAGGATCA TAAAATGTGG
GAAGAATACA ATAAAAGATG TATTCAATGT GGAAGCTGTA CTCTAGCTTG TAGTACATGT
ACATGCTTTA CAACAAGGGA TATAGTTCAT GATTCTAATC ATAACATAGG TGAGAGAAAG
AGAATACAAG CATCTTGCCA TGTAGATGGA TTTGATGAAA TGGCTGGTGG ACATGTATTT
AGAAAAACTG CTGGCGATAA AATGAGATAT AAAGTTATGC ATAAAATTCA TGATTATAAA
GTTCAATTTG GAGAAGAGCA TATGTGTGTA GGATGTGGAA GATGTACAGA TAGATGTCCA
GAACATATAT CAATTACAGC TACTATCAAT AAGGTTTCAA AAGCAGTAAA AGAGATAATG
GAGGAGATGT AA
 
Protein sequence
MGYKLNLKEV NDLFNELKKE YIIYAPKRFE KQGRYSDTDI IKYDVINNVE EIVHNEKSTY 
PVKEVITPIS QTLYYFIENE FRESKMDSQK KILIFARPCD INAQRRQDTI YLKNGNFEDT
FYKRMRDRVK FICMECTEGW DTCFCTTMNS NKTDDYSLAV RFNEDNLLFN VKEEEFDKYF
EGKEEEEFEL KFIEENIAKV ELPEIESVEV LNKLKDHKMW EEYNKRCIQC GSCTLACSTC
TCFTTRDIVH DSNHNIGERK RIQASCHVDG FDEMAGGHVF RKTAGDKMRY KVMHKIHDYK
VQFGEEHMCV GCGRCTDRCP EHISITATIN KVSKAVKEIM EEM