| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1785 |
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| Symbol | |
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| ID | 4202823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2012076 |
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| End bp | 2013428 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082657 |
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| Product | PTS system, sucrose-specific IIBC component |
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| Protein accession | YP_696221 |
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| Protein GI | 110799103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01996] PTS system, sucrose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000306537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG AACAAATAGT TGCTCAAGAA ATATTAAAAA ATATTGGTGG AAAAGAAAAT
ATAAAATCAA TGGAACACTG TGCAACTAGA TTAAGACTTA TAGTTAAAGA TAAAAGTCTA
ATAAATGAAA AGGCAATTGA GAATATTGAT GGGGTAAGAG GACAATTTTT TGCTGCTGCT
CAATATCAAA TAATTCTAGG AACTGGGTTT GTAAATAAAG TCTTTGCAGC TATGAATGGT
GAAGGAGTAG AAACTGGGAA TGTAAAAGAA GATGCATATA GTGATATGAC TTTACCACAA
AAAATATCTC GTACTTTAGG AGATATTTTC GTTCCTATAA TTCCAGTATT AGTTGCAACA
GGTTTATTTA TGGGATTAAG AGGACTTTTA ACTAATTTAG GAGTTGAATT TAGTCCAACT
TTTAATACTT TATCAGAGGT TTTAACAGAT ACAGCATTTA TATTCTTACC AGCCTTAGTA
GCTTGGTCAA CAATGAAAAA ATTTGGTGGA ACACCTGTAG TTGGTATAGT ATTAGGGCTT
ATGCTTGTAG CCCCTCAGCT TCCAAATGCT TGGCAGGTAG CAGGAGGAGC AGATCCAATA
TATATTTCTT TATTAGGAAT AAGTATCCCT ATAGTAGGGT ATCAAGGATC AGTACTTCCA
GCTTTAGTAT TAGGTATTAT AGCAGCTAAA TTAGAAAAAT TTATTAGAAA GTTTATGCCA
GATGTACTAG ATTTAATATT TACTCCATTT TTAACTTTAT TAGTATCAAT GATTCTTGGA
CTTTTAGTAG TAGGTCCTAT AATGCATACA AGTGAAGTCT ACATATTAGA TTTATTTAAA
ATGTTTTTAA GCTTACCATT TGGAATAGGT GGAGCAATAA TTGGAGGAGT TCATCAAGTT
ATAGTTGTAA CTGGAGTTCA TCATATATTT AATGCTTTAG AAGTTGAATT AATTTCAAGT
ACAGGATTAA ATCCATTTAA TGCAGTAATA ACCGGGGCTA TAGTAGCTCA AGGAGCAGCA
GCTCTTGCAG TTGGATTTAA GACAAAAGAT AAGAAAAAAC GTTCATTATA TATTTCTTCA
GCAATACCAG CCTTTTTAGG AATTACAGAA GCGGCCATAT TTGGAGTAAA CTTAAGATTT
ATTAAACCAT TTATATTTGC ATGTATAGGT GGAGCTGCAT CAGGAATGTT TGCATCAATG
ATGAAATTGG CTGGAACTGG TATGGGAATA ACAGCTATAC CGGGAACACT GCTTTATATT
AATACAGGAT TAATTCAGTA CTTCATAACA ATTGCTATTG GATTTGCTAT TTCATTTGCA
TTAACATATA TATTCTTTAA ACCACAAGAA TAA
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| Protein sequence | MSKEQIVAQE ILKNIGGKEN IKSMEHCATR LRLIVKDKSL INEKAIENID GVRGQFFAAA
QYQIILGTGF VNKVFAAMNG EGVETGNVKE DAYSDMTLPQ KISRTLGDIF VPIIPVLVAT
GLFMGLRGLL TNLGVEFSPT FNTLSEVLTD TAFIFLPALV AWSTMKKFGG TPVVGIVLGL
MLVAPQLPNA WQVAGGADPI YISLLGISIP IVGYQGSVLP ALVLGIIAAK LEKFIRKFMP
DVLDLIFTPF LTLLVSMILG LLVVGPIMHT SEVYILDLFK MFLSLPFGIG GAIIGGVHQV
IVVTGVHHIF NALEVELISS TGLNPFNAVI TGAIVAQGAA ALAVGFKTKD KKKRSLYISS
AIPAFLGITE AAIFGVNLRF IKPFIFACIG GAASGMFASM MKLAGTGMGI TAIPGTLLYI
NTGLIQYFIT IAIGFAISFA LTYIFFKPQE
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