| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1783 |
|---|
| Symbol | |
|---|
| ID | 4203319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2009462 |
|---|
| End bp | 2010925 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 638082655 |
|---|
| Product | sucrose-6-phosphate dehydrogenase |
|---|
| Protein accession | YP_696219 |
|---|
| Protein GI | 110801242 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
|---|
| TIGRFAM ID | [TIGR01322] sucrose-6-phosphate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.351625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTTT TAAATGATGA ATATATAAAC AAAAAATCAA AAGAATATTA TAATAAAACT
AAAGATATAT GGAGAGATAA TTTTCATTTT GAGCCTCCCT TTGGACTTAT AAATGATCCA
AATGGATTAA GTTATTATAA AGGAGAATAT TACATATTTT TTCAGTGGAA CCCATATGGC
TGTGAGCACA AGAATAAACA TTGGGGAATT GTAAAAACAA AGAATTTTAA AGATTTTTCA
ATACCTAAAA TTGTCTTAAC TCCAAAAGAA TATTTTGATA AGAATGGATG TTATTCAGGG
GGAGCTATTG TTAAGGATGG CAACTTACAA GTGTTTTATA CTGGGAATGT TAAAGGGGAT
AAAGGAGAGA GAATATCTTA TCAATGCAAG GGGATTCTTG AAGAAAATGG ACAATTGAAA
AAATTGGGTC CAGTTATTTC TACATTACCA AAAGGATATA CAGCTCATTT TAGAGATCCA
TATATTTGGA AAAATAATGG TTATTATTAT ATGATTCTTG GAATACAGAC TGAAAAGCTA
AAGGGTAGAT GCGTAATATA TAAATCAAAT GATTTAGATG ATTGGGATTT TTATGGAGAA
CTAAAAACGT CTTATGATGA TTTTGGATTT ATGTGGGAAT GTCCATCCTT TTTTAAAATT
GATAATAAGG ATATTTTTAT ATTTTCTCCT CAAGGAATTA AAGAAGAAGA GTTTAGATAT
CAAAACATAT ATCAATCGGG ATACTTAATA GGAAATTTAA ATTATGATAC TTTAGAATTT
AAAAATAATA ATGAGTTCAA GGAATTAGAT ATGGGCTTTG ATTTTTATGC GCCTCAAGTA
TTTAAGGACG AAAAAGGAAG AAATATATTA ATTGGATGGA TGGGGCTTCC TGAAAAAGAA
GAGTTTCATT GTAGTAGGGA GAATGGATGG ATATTTTCTT TAACCATGCC TAGAGAATTA
ACTTTAAAGA ATGGAATTTT ACATCAAAAT CCTATAGAAG AGATGAGAAA GCTTAGGGGA
GATAAAATTG TAAGCTTAAA AAATATAATT ATTGAAGATT TAAATTTTAA TGAAGTAAAA
GAAAATAGTT ATGAGCTTAA ACTAGATATA GAAAGACAGG AAGCATCAAA GATTGAAATT
AATTTTATGG AGAGTAATGA GGAACATACA TCTTTAATTT ATGATTTTAA AAAAGAAATT
TGTATAATAG ATAGAAATTC AATGATTAAT GGAGAAAAGG GTATAAGGAA GTTTAAGTTA
CATTCTAATG GGAATTTAAA AATTAATATG TTTGTGGATA AATCATCAGT AGAAATATAT
TTTCAAGATG GAATTGAAGT AGCATCATTA AAACTTTATC CTAAAAAAGA TAGCTTTAAC
TTAAGTTTAA AATCAGAAGA GGGTAAAATT AAAATAAATT CCTTGAGTAT ATGGGAGATG
AATGAGGTGA ATTATAATGA ATAA
|
|---|
| Protein sequence | MEFLNDEYIN KKSKEYYNKT KDIWRDNFHF EPPFGLINDP NGLSYYKGEY YIFFQWNPYG
CEHKNKHWGI VKTKNFKDFS IPKIVLTPKE YFDKNGCYSG GAIVKDGNLQ VFYTGNVKGD
KGERISYQCK GILEENGQLK KLGPVISTLP KGYTAHFRDP YIWKNNGYYY MILGIQTEKL
KGRCVIYKSN DLDDWDFYGE LKTSYDDFGF MWECPSFFKI DNKDIFIFSP QGIKEEEFRY
QNIYQSGYLI GNLNYDTLEF KNNNEFKELD MGFDFYAPQV FKDEKGRNIL IGWMGLPEKE
EFHCSRENGW IFSLTMPREL TLKNGILHQN PIEEMRKLRG DKIVSLKNII IEDLNFNEVK
ENSYELKLDI ERQEASKIEI NFMESNEEHT SLIYDFKKEI CIIDRNSMIN GEKGIRKFKL
HSNGNLKINM FVDKSSVEIY FQDGIEVASL KLYPKKDSFN LSLKSEEGKI KINSLSIWEM
NEVNYNE
|
|---|
| |