Gene CPF_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1782 
Symbol 
ID4202365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2008522 
End bp2009469 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content30% 
IMG OID638082654 
Productfructokinase 
Protein accessionYP_696218 
Protein GI110800445 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0521883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG TATTTTGTAT AGGAGAATTA TTAATAGATT TTATAGGAAA AGATATAGGA 
AAAGGTCTTA AAAATGGAGT AAACTTTGAG AAAAAGGCTG GAGGAGCTCC AGCAAATGTT
GGAGCAGCAG TTTGTAAGCT TGGAGGAGAA TCTTATTTTT TAGGACAAGT TGGTAATGAC
TCTTTTGGAG AATTTCTAGT TGATATGCTA AAAAATATAG GTATAAATAC TGAAATGACT
AAAATGGATG GATATACCAC TTTAGCATTT GTAGCTATTG ATGAAAATGG AGAAAGAGAT
TTTGAGTTTC ATAGAGGCAG TGATGGAGAA TATTCATTTA ATAATATTGA TTTAAGTAAA
ATAGAAAAGG ATGATATAAT TCACTTTGGT TCAGCTACGG GATTCTTAAA AGGTGAACTT
AAGAATACTT ATTTTAAACT TTTAGAGATT GGACGTAAAA ATGGAAACTT TATATCTTTT
GATCCAAACT ATAGAGATAT GCTTATTAAA GAAGAAGGAA TTGAAGAGTT TAAGGAAGAC
TGTAAGAAAT TTATAAGCTC TTGTGATTTT TTAAAGCTTA GTGATGAGGA GATAAAGCTA
TTAACTGAGG AAGAAGATTT AGAAAGAGGA GTTGAAAAAC TTCATTCTTT AGGAGCGAAA
ATAATAGCGG TTACACTAGG TGGAAAAGGA ACTCTTTTAA GTAATGGAAT TCATTCAGAG
ATAGTTCCAT CAATAAAAAT TAATCAAGTA GATTCAACTG GGGCAGGGGA TGCTTTCGTT
GGGGCTGTTC TTAAGAAAGT AAGTGAATTA GAAAATAAGA AGAATTTAGA TTTAAATTTA
TGGAGAGAAA TTATAAGTTA TGGAAATAAG GTTGGAGCAT TGACATGCAC AAATTATGGG
GCTATTGATG CTATTCCAAA TGAAGAAGAT TTAATGAAAT ATATATAG
 
Protein sequence
MNKVFCIGEL LIDFIGKDIG KGLKNGVNFE KKAGGAPANV GAAVCKLGGE SYFLGQVGND 
SFGEFLVDML KNIGINTEMT KMDGYTTLAF VAIDENGERD FEFHRGSDGE YSFNNIDLSK
IEKDDIIHFG SATGFLKGEL KNTYFKLLEI GRKNGNFISF DPNYRDMLIK EEGIEEFKED
CKKFISSCDF LKLSDEEIKL LTEEEDLERG VEKLHSLGAK IIAVTLGGKG TLLSNGIHSE
IVPSIKINQV DSTGAGDAFV GAVLKKVSEL ENKKNLDLNL WREIISYGNK VGALTCTNYG
AIDAIPNEED LMKYI