Gene CPF_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1781 
Symbol 
ID4203575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2007886 
End bp2008302 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content20% 
IMG OID638082653 
Producthypothetical protein 
Protein accessionYP_696217 
Protein GI110800601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00866522 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGGAGT TTTTTAAAGA TATATCTTAT GATGATAGAA ATCTTTTAGC TATAGGTCTT 
GCATTTATAT CAAATTTAAT ATTTTTAAAT ATAACAGAAA GGGAAGTTGT ATTTAATAAT
ATCTATGAAA TACTTAATTT AAAGGGGTAT GAAGCTTTGA AGGAAGTATT TGTTATTTTT
ATAACTTTTA TAGCTATAAT TTTTTTGATT TTTGCTATGA TTATTAGTAT AAATATAATT
TTACATTCCT TAGAGGTCTT TAATAAAATA GTATCCTTAG GAACTATTAT AGTAATTTAT
ATAATAGCTT TTTATGGATT AAATAACAGT ATTCAAGGAT TTAAGATATT ATTTTTAACT
TTATTTTTTG TAGGATTATT TTTTAAGATA TGGGAAGAGG TAAAGAATAA TAAATAA
 
Protein sequence
MKEFFKDISY DDRNLLAIGL AFISNLIFLN ITEREVVFNN IYEILNLKGY EALKEVFVIF 
ITFIAIIFLI FAMIISINII LHSLEVFNKI VSLGTIIVIY IIAFYGLNNS IQGFKILFLT
LFFVGLFFKI WEEVKNNK