Gene CPF_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1765 
Symbol 
ID4201467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1989578 
End bp1990678 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content23% 
IMG OID638082637 
Producthypothetical protein 
Protein accessionYP_696201 
Protein GI110798839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000385845 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC ATCCAATTGT TTATATGTTT TTTTCTTTTA TAATGATTTT AACCTTTTTC 
GATATTGTAA AGAAAGGTAA TAGTTTTTCA GAATTAGAAA ATAGGAATCT TGCAAGGAAA
CCTATATTTT CAATAAGTTC TTTTGTAGAG GGAAAATACA GAGATAAATA TGAAGAGTAT
ATAAATGATA ATTTTATTTT TAGAAATCAG TGGATAAACT TAAAATCCAT AAGTGAGTAC
ACCTTAGGAA AGTTAGAAAA TAACAATATA ATTTATGGAA AAGAAAACTA TATGTTTGAA
AAGAATATTT CTTATGATAA GGAGAGATTT AAAAATAACA TAAATTCCAT AAATAGATTT
ATTGATATAT ATGAGGGCAA GGTTACTACT ATGATAGTTC CAAATTCATA TACCATTTAT
GAAGAATATA TTCCATGGGG AATAAACCTT TTAAATCAAG AGAATCTTAT AAATGAAGTT
TATAGGGCAA ATTCTAAAGA TAGAAATATA GATTTAGTGA GTTTATTTAA GAAAAATAAA
GAGGAATATA TATATTATAA AACTGATCAC CATTGGACAA GTTATGGGGC ATATTTAGCA
TATAAAGCTT ATATTGAAAG CTTAGGAGAA AAACCTATTG ATTTAAATAG TTTAAAAAAG
AATGAAGCTA CAGGATTTTA TGGAACATAT TTTTCAAAGG CTAAACTTTT CAGTGCAGAA
AGTGATATTT TAACTTATTA TGATATAGAT AATATTACTA TGAATATACA GGAGAAAATT
TTTGAAAGTT TATATGATTA TGATAAGTTA AATACTAGGG ATAAGTACTC AGTATTTATT
AGAGGAAATA ATGGACTTAC TATTATAGAA AATAAAAATA TAAAGTTAGG AAAAAAATTA
TTGATATTTA AAGATTCCTT TGCTAATTCT ATGATTCCAT TTTTAAGTAA AAACTTTCAG
GAAATTCATG CGGTTGATCT TAGGAGTTTT TCATGGAAAG TAAGTGAATA TATGAAAAAT
ACGAATTTTG ATGAGATATT AATATTATAT AATATGGAAA ATTTTTTGAG AGATATAAAT
ATTACTAGGA TAAAATATTA A
 
Protein sequence
MKKHPIVYMF FSFIMILTFF DIVKKGNSFS ELENRNLARK PIFSISSFVE GKYRDKYEEY 
INDNFIFRNQ WINLKSISEY TLGKLENNNI IYGKENYMFE KNISYDKERF KNNINSINRF
IDIYEGKVTT MIVPNSYTIY EEYIPWGINL LNQENLINEV YRANSKDRNI DLVSLFKKNK
EEYIYYKTDH HWTSYGAYLA YKAYIESLGE KPIDLNSLKK NEATGFYGTY FSKAKLFSAE
SDILTYYDID NITMNIQEKI FESLYDYDKL NTRDKYSVFI RGNNGLTIIE NKNIKLGKKL
LIFKDSFANS MIPFLSKNFQ EIHAVDLRSF SWKVSEYMKN TNFDEILILY NMENFLRDIN
ITRIKY