Gene CPF_1764 details

Gene Information

• Locus tag: CPF_1764
• ID: 4202299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 1986215
• End bp: 1989496
• Gene Length: 3282 bp
• Protein Length: 1093 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638082636
• Product: sensor histidine kinase/response regulator
• Protein accession: YP_696200
• Protein GI: 110800980
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase; [COG3292] Predicted periplasmic ligand-binding sensor domain

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.412354
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATATAA AAAAATTAGT TATAAGATAT GCTTTTCTCT CCTTAATACT AATACTAATT 
CAAGGCAAAA ATGTTTTTGC TTTAGGAGAA TCAGAAGTAA GATTCAACAA TTTAACATTA 
AAGGACGGAT TATCCCAATC TACTGTAAAT AAGATAATTC AAGATAATAA AGGGTATATG 
TGGTTTGGGA CATCAGATGG ATTAAATAAA TACAATGGAC ATGAGTTTGT TATTTTTAGA 
GAATTAGTAA ATGATAAAAA GAGTATTAAT TCAAGTTTTA TATCAGCTCT AATAGAATAT 
GACAATGATA ATATTCTTGT TGGAACTAGC AAGGGTATAA GCAAAATAAA TGTAATAACA 
AATGAAGTAA GTAGAATGTT TGAGGATGAA GAGGGAAAAA GCAAGCTATC AAATAATAAT 
ATATGGGATA TATTAAAGCA TAGTGATGGA ACTATTTGGA TAGCTACTAG AAAAGGGTTA 
AATATTTATA ATCCTAAAAC AGGTGATATG TATCAAATTT TTAAAGATAC AGAACCTAAG 
GGATTAAAAA GCAATGTAGT TACTTCTTTA TGTGAGGATA AATACGGAAA TGTATGGGTT 
GGAACAAGCG AAGGTTTAAG TGTAATTAAT ACAAAGACTA AGGAGATTCA ACCTATAAAT 
GATATATTAG ATAATGATAA TTCGGCAATT TCTAATATTT ATAGAGATAG AGATGATAAT 
ATATGGATAG TAACAGATAA TCATATTATG TTAGTATCAA GCAATTATAA AGATATTACT 
TATTTTGATA AAGAATTAGA GTCTTTTAAA ATATCTCCAG ATAGTGTAAA TGCCATTTAT 
GAAGATAAAT ATAATAATTT ATGGATATCA ACTCAAAATG GATTATTAGA ATATAATAAA 
GAAAATAAAA AAATGCATCT TTTTGAAAGC AGGTATTATG ATGATACTAG TTTAGTTAAC 
GATAATGTAT TAACTGCATA TGAAGATAGA AGTGGATTGC TTTGGTTTGG TACTTATAAT 
GGAATAAGTT TATTAAATCC TAAGCAGCCT TTTAAGCATT ATAGAAGAGA GCCTGATAAG 
GAAAATACTA TTAGTGATAA TAGTATGAGT GGAATTTATA AAGATTCTGA TGGAATGTTA 
TGGCTTGGAA CTAACTCAGC AGGATTGAAT AAATTAAATA CTATGACTGG GGAAGTTACA 
AATTTTTATA GTAATAATAG TGATGAAAAT ACCTTAAGTA GTAATGTAGT TTGGCAAATA 
TGTGAAGCTG ATAAAGATAA TTTGTGGGTT GCAACTCAAG GTGGAGTTAA CAAGATAAAT 
AAAAAAAGTG GAAATGTTGA AAGATTAAAG TATCCAGATA ATATGAGAGA ACGAAATAAA 
ATGGATGCTA GAAATGTTTT TGTGGACAAG GATGGATTAT TGTGGATAGG AGCAAGAGGT 
GGATTACAAT CCTATGATGA TAAAACAGGA ACTTTCACTG ATTATTCCAA TGTTTTTAAG 
GCTGTAGGTA TAGTTGAGAA TGCTGTAACA AGTATTTCAC AAGATGAAGA GGGATTTTTA 
TGGATTACTA TAGGTATTGA TGGTGGTGTA GTAAAGTTTG ATAAGGATAA GGGCGTACTA 
AAAAGCTATT TAAATAATAG TTTTGATAGC AATAGTCTTA TAAATAATGG AGTGCGTTGC 
TTAGAAAAAG ATTCAAAGGG AAATGTTTGG ATTGGAACTG AAGCGGGATT AAGTAAACTA 
GATCCTAAAA CTGATAAATT TACTAACTAT ACTGTTGTAA ATGGATTAGC TAATAATTTT 
ATATATGGAA TACTTATAGA CGAAGAAGAC AATCTTTGGA TAAGTACAAA TGATGGTCTA 
TCTAGATTTG ATCAAAAAAC AAATAAGTTT ATAAATTATA CTGCCATGGA TGGGCTACAA 
AGTAATGAGT TTAACGGCAG ATCTTATTTT AAAAGTAAAG ATGGAGAAAT GTTTTTTGGT 
GGAATAAATG GGGTAACTGC ATTTTATCCT AAGGACGTTT TAAAATTATC AGACAATAGA 
AATAAGAGCA AAGTAGTAAT AGATGAAATT AAGGTTAATA ATAAAACTTA TCCATACTAT 
GGGGGAACTC TTAGCTTAAA ATATAATGAA AATAATATAT CCATTGATTT CTTTTTGCCA 
GATTATTTAA ATACAACAAA AACTACTTAT GAGTATAAGT TAGAAGGTGT TGATGAAGAG 
TGGACTTTTG CTAATAAAAG AAATAATGCT AATTATGCTA CCTTAGATTC TGGAACATAT 
AAGGTTTTAA TTAGAGCCAG GGATAACCAT GGAGATTTAA CTCCAGTGAC TGCTCTAGAC 
TTAAAGATTG CGCCACCACC ATGGCGTACA CCAACGGCTT ATTTAATATA TTTTTCAAGT 
GCAGTAATAG TTATTTTCTT AATGTGGAGT TATGTAACTG CCTTAGAGAA AACTGTTAAG 
AAAAGAGCTG AGCAACTTAA AAAAGAGGCT AAGGAAAAAG AAAAACTTTA TATAGAAAAA 
GAGAAGCTTT ATAAAGAAGC AGCGGATCTT AAAGATGAGA TGATAAAAAG GCAAAAATTC 
AAAAATGATT ATTTCGTAAA TCTTTCACAT GAGCTTAGAA CTCCATTAAA TGTGATATTA 
GCTACAGTAC AGCTAATAAA ACTAAAGAAT AAGGAAGATT GCTTAGGAAA ATATCAAGTG 
GAAGATTATA CTAATACTCT TAGAAATAAT GCTGATCATT TGCTTAAGAT AATAAATGAT 
ATAATAGATT CATCTAAAAT AGAGTCAGGT GCATATAAAT TGAATATAGA AAAGCAGGAT 
ATAGTTTCTT TAGTTGAGGA TACGGCTTTA AGTTTAAAAG CTTATATTGA AGAAAATAAT 
TTAGATATTA TAATAGATCC TGAAATAGAA GAATTAGATG TAGAATGTGA TAAAAATGAG 
ATTGAAAGAT GTGTTATAAA CCTTTTATCT AATGCTATAA AATATACTCA TGGATATGGT 
ACAATTGAAG TTTTCATAAG AGAGTGTGAA AATGAAACTG TAGAAATTGC TATAAAAGAT 
ACTGGAGTTG GAATATCTAA GGAGCAACAA AAGATTATAT TTGATAGATT TGTACAAGCT 
GATAGCATAT CTAAAAAACA ATATAGAAGT AGTGGTATAG GCTTAACATT GGTAAAAAGT 
ATAATAGAAC TTCACCATGG TACAATAAGA GTAGAAAGTG AACTTAATAA AGGAAGTACT 
TTTATAATCA CATTACCTAT AAGACAAGAG AAAAGTAAAT AA 

 

Protein sequence

MNIKKLVIRY AFLSLILILI QGKNVFALGE SEVRFNNLTL KDGLSQSTVN KIIQDNKGYM 
WFGTSDGLNK YNGHEFVIFR ELVNDKKSIN SSFISALIEY DNDNILVGTS KGISKINVIT 
NEVSRMFEDE EGKSKLSNNN IWDILKHSDG TIWIATRKGL NIYNPKTGDM YQIFKDTEPK 
GLKSNVVTSL CEDKYGNVWV GTSEGLSVIN TKTKEIQPIN DILDNDNSAI SNIYRDRDDN 
IWIVTDNHIM LVSSNYKDIT YFDKELESFK ISPDSVNAIY EDKYNNLWIS TQNGLLEYNK 
ENKKMHLFES RYYDDTSLVN DNVLTAYEDR SGLLWFGTYN GISLLNPKQP FKHYRREPDK 
ENTISDNSMS GIYKDSDGML WLGTNSAGLN KLNTMTGEVT NFYSNNSDEN TLSSNVVWQI 
CEADKDNLWV ATQGGVNKIN KKSGNVERLK YPDNMRERNK MDARNVFVDK DGLLWIGARG 
GLQSYDDKTG TFTDYSNVFK AVGIVENAVT SISQDEEGFL WITIGIDGGV VKFDKDKGVL 
KSYLNNSFDS NSLINNGVRC LEKDSKGNVW IGTEAGLSKL DPKTDKFTNY TVVNGLANNF 
IYGILIDEED NLWISTNDGL SRFDQKTNKF INYTAMDGLQ SNEFNGRSYF KSKDGEMFFG 
GINGVTAFYP KDVLKLSDNR NKSKVVIDEI KVNNKTYPYY GGTLSLKYNE NNISIDFFLP 
DYLNTTKTTY EYKLEGVDEE WTFANKRNNA NYATLDSGTY KVLIRARDNH GDLTPVTALD 
LKIAPPPWRT PTAYLIYFSS AVIVIFLMWS YVTALEKTVK KRAEQLKKEA KEKEKLYIEK 
EKLYKEAADL KDEMIKRQKF KNDYFVNLSH ELRTPLNVIL ATVQLIKLKN KEDCLGKYQV 
EDYTNTLRNN ADHLLKIIND IIDSSKIESG AYKLNIEKQD IVSLVEDTAL SLKAYIEENN 
LDIIIDPEIE ELDVECDKNE IERCVINLLS NAIKYTHGYG TIEVFIRECE NETVEIAIKD 
TGVGISKEQQ KIIFDRFVQA DSISKKQYRS SGIGLTLVKS IIELHHGTIR VESELNKGST 
FIITLPIRQE KSK