| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1758 |
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| Symbol | |
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| ID | 4203887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1978006 |
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| End bp | 1978968 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082630 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_696194 |
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| Protein GI | 110800120 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00010235 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGG AGACTTTGAG CAAAAGAAAA AAGAAGAATT TAGAGAAAAA ATATATACGA
AGAAGAATTG GGGTAGTATT AATTGCTATA GTTGCTTTAG TCTTTTTAGG GACAAGAATT
GCTTTAAATC ATAAAGTTGA AGTAGCTAAG GGCAATACAG GTGATGAAGG TGAAAATAAA
GAATTAGTGA TGGAAGAAGC TACAGTTGAG CTTCCACAAT ATAAATCAAC AGATATTGTT
CCAGGTAGAA ATGTTACTTT TGATGGTAAA AATTATGCTG TTAATGTAAA AGATGTAAGT
AAAATGGTAG AAGGTTCTTA TGAAGGAAAT GAAAAATATG TCTTTCTTAC CTTTGATGAT
GGACCAAGTC CACTTACAGA ACAAGTTTTA GATATATTAA AAAATGAAAA TGTAAAGGGG
ACTTTTTTTA TGTTAGGTTC TAGACTAGAC TCTGGACAAG CACCTAAGGA GAGTTTAAAA
AGAGCCATAG AAGAGGGGAA TGCTATAGCC AATCACAGTT ATAGTCACAA TTTTAAAAAG
CTTTATCCAG GAAATATAAC AGATGTTAAT TATTTTATGG ATGAATTTAA AAGAACAAAT
GATATAATGA GGGATGTTCT TGGTGTTGAG TTTGATACAA ATGTTTTAAG AATGCCAGGA
GGGTATAATA GTAGAGTATA TTATAAGGAT AGAAATTTAG AAGAGTTAAA TAATAATTTA
GAGAGTAATA AAATAGTAAG TATAGATTGG AATGCTTTAA ATGGTGATGC AGAAGGAAAA
CCTTATACCT TAAATGAAAT GATTGATTAT GTAAAAAGAA CATCAAGGGG AAAAAATCAA
GTAGTTTTAC TTATGCATGA TACCTTTGGA AAAGAAAAGA CAGTAAAAGT ATTACCTGAA
ATAATAAAAT ATTATAAAGA AGAAGGGTAT GAGTTTAAAA CCATAAGTGA TGCTAATGTA
TAA
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| Protein sequence | MSKETLSKRK KKNLEKKYIR RRIGVVLIAI VALVFLGTRI ALNHKVEVAK GNTGDEGENK
ELVMEEATVE LPQYKSTDIV PGRNVTFDGK NYAVNVKDVS KMVEGSYEGN EKYVFLTFDD
GPSPLTEQVL DILKNENVKG TFFMLGSRLD SGQAPKESLK RAIEEGNAIA NHSYSHNFKK
LYPGNITDVN YFMDEFKRTN DIMRDVLGVE FDTNVLRMPG GYNSRVYYKD RNLEELNNNL
ESNKIVSIDW NALNGDAEGK PYTLNEMIDY VKRTSRGKNQ VVLLMHDTFG KEKTVKVLPE
IIKYYKEEGY EFKTISDANV
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