Gene CPF_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1745 
Symbol 
ID4201101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1963928 
End bp1964425 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content29% 
IMG OID638082617 
ProductDedA family protein 
Protein accessionYP_696181 
Protein GI110798978 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0507809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGC AAGATATTTT GTATTATATA CATACATATG GGTTAATTGT ATTATTTTTA 
ATAGTTGTAG GTGAATATTG CGTACCTGCA ATGCCTACAG GTATAGTAAT GCCAGCGGCT 
GGCATAATTG CAGGACAAGC TCATAAGGGA ATAATAAAAG TAATGCTAAT ATCCTTAATT 
GCAGGTCTAG TAGGAAGTAT AATATTATAT TTGTTAGGTT ATTTTGTAGG ATCAACACTT 
TTAGAAAAGA TTAAAATTAA ACATCCTAAA ATAGAAGATA AGCTTGAAAA AACAGAAAAA 
ATACTAGAAA AGCATAGTTT TTTAGGGATA TTCATATGTA GATTAATACC TATTATTAGA 
ACCTATGTAT CCTTAATATG TGGCACTGTA AAGGTTAATT TTTTTAAGTT TATTATTTTT 
TCTATACCAG GTATATTTTG CTGGAACTTT ACAGGAATTG TAGTTGGATA TTTCTTTGGA 
GGAAAGATAA GATTTTAG
 
Protein sequence
MTMQDILYYI HTYGLIVLFL IVVGEYCVPA MPTGIVMPAA GIIAGQAHKG IIKVMLISLI 
AGLVGSIILY LLGYFVGSTL LEKIKIKHPK IEDKLEKTEK ILEKHSFLGI FICRLIPIIR 
TYVSLICGTV KVNFFKFIIF SIPGIFCWNF TGIVVGYFFG GKIRF