Gene CPF_1741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1741 
Symbol 
ID4202085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1960736 
End bp1961593 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content30% 
IMG OID638082613 
Producthypothetical protein 
Protein accessionYP_696177 
Protein GI110799261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.158642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAGAA CTAACATAAG TTACGGAGCT AAGGATATTT TATATAAGCT TATGGGACAA 
CTTTATAAAG GAAAACCACT AGAAATTTTA GGCGTTAATG ATATGCCTAA AATAATGGAC
AGGCTACCAA GAAACTTTTT TGAAAATGAA GTTTCAGATG GAGGGCCTAA TGAAATATTT
ATTTTAGAAG ATGGCTCTAT TTTACTTTTT GGATATGAGG ATGAAAAAAA TATAGATGAA
AATATGTTTA TATACTTAGA GGTGGCTGTT AAGGTTATAA AGAGATATTA TAAGCATAGA
GGAGCCTTTC CAAAGGTTAG AATGGCTATA ATTTATAATT CAAGTGTTAA GGAAGCTAGA
AACACATTAA GTTTTGGAGA TATACTTATT TGTTCAGAAA GCATATTTAT GAATAAGCTA
ACTGCGGAGA AAGTTTTAAA AGAGTTAAAG GAGAAGGTTT TAGAAGATAA TTTAACTCAA
GCTGATAAGA TAAAATTCAT AATGTTGCCA CTTATGAAGA GTGAGCATGA TGATAGCAAT
ATTTTAAGAG ATTGTGTTCA GTTAGCAAAA TCAATAAAAT CTGAAAGAGA TGAGGCAATT
ATATTAAATG GAATAATTGA ATCTACAGAT AAGTTTATTA GTGAAGAAGA AGCAAGAGAA
CTTAAGGAGT TGTTAGAAAT GACTAAGATT GAGAGATTAT ATAATGAAGA AAGAGATTTA
GCTGTTAAAA ATGCAAGAAA AGAAGAGCAA TTAAGAATAG CAAAAAGCCT TGCAGGCATA
TTATCACCTG AGTTAATATC AGAAAAGCTA GGTATAACAA TAGAGGAAAT TTACGAGCTT
CAAAATGCAG AAGGCTAA
 
Protein sequence
MGRTNISYGA KDILYKLMGQ LYKGKPLEIL GVNDMPKIMD RLPRNFFENE VSDGGPNEIF 
ILEDGSILLF GYEDEKNIDE NMFIYLEVAV KVIKRYYKHR GAFPKVRMAI IYNSSVKEAR
NTLSFGDILI CSESIFMNKL TAEKVLKELK EKVLEDNLTQ ADKIKFIMLP LMKSEHDDSN
ILRDCVQLAK SIKSERDEAI ILNGIIESTD KFISEEEARE LKELLEMTKI ERLYNEERDL
AVKNARKEEQ LRIAKSLAGI LSPELISEKL GITIEEIYEL QNAEG