Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1741 |
Symbol | |
ID | 4202085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1960736 |
End bp | 1961593 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082613 |
Product | hypothetical protein |
Protein accession | YP_696177 |
Protein GI | 110799261 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.158642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGAAGAA CTAACATAAG TTACGGAGCT AAGGATATTT TATATAAGCT TATGGGACAA CTTTATAAAG GAAAACCACT AGAAATTTTA GGCGTTAATG ATATGCCTAA AATAATGGAC AGGCTACCAA GAAACTTTTT TGAAAATGAA GTTTCAGATG GAGGGCCTAA TGAAATATTT ATTTTAGAAG ATGGCTCTAT TTTACTTTTT GGATATGAGG ATGAAAAAAA TATAGATGAA AATATGTTTA TATACTTAGA GGTGGCTGTT AAGGTTATAA AGAGATATTA TAAGCATAGA GGAGCCTTTC CAAAGGTTAG AATGGCTATA ATTTATAATT CAAGTGTTAA GGAAGCTAGA AACACATTAA GTTTTGGAGA TATACTTATT TGTTCAGAAA GCATATTTAT GAATAAGCTA ACTGCGGAGA AAGTTTTAAA AGAGTTAAAG GAGAAGGTTT TAGAAGATAA TTTAACTCAA GCTGATAAGA TAAAATTCAT AATGTTGCCA CTTATGAAGA GTGAGCATGA TGATAGCAAT ATTTTAAGAG ATTGTGTTCA GTTAGCAAAA TCAATAAAAT CTGAAAGAGA TGAGGCAATT ATATTAAATG GAATAATTGA ATCTACAGAT AAGTTTATTA GTGAAGAAGA AGCAAGAGAA CTTAAGGAGT TGTTAGAAAT GACTAAGATT GAGAGATTAT ATAATGAAGA AAGAGATTTA GCTGTTAAAA ATGCAAGAAA AGAAGAGCAA TTAAGAATAG CAAAAAGCCT TGCAGGCATA TTATCACCTG AGTTAATATC AGAAAAGCTA GGTATAACAA TAGAGGAAAT TTACGAGCTT CAAAATGCAG AAGGCTAA
|
Protein sequence | MGRTNISYGA KDILYKLMGQ LYKGKPLEIL GVNDMPKIMD RLPRNFFENE VSDGGPNEIF ILEDGSILLF GYEDEKNIDE NMFIYLEVAV KVIKRYYKHR GAFPKVRMAI IYNSSVKEAR NTLSFGDILI CSESIFMNKL TAEKVLKELK EKVLEDNLTQ ADKIKFIMLP LMKSEHDDSN ILRDCVQLAK SIKSERDEAI ILNGIIESTD KFISEEEARE LKELLEMTKI ERLYNEERDL AVKNARKEEQ LRIAKSLAGI LSPELISEKL GITIEEIYEL QNAEG
|
| |