| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1737 |
|---|
| Symbol | |
|---|
| ID | 4201567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 1958366 |
|---|
| End bp | 1959121 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 638082609 |
|---|
| Product | ABC transporter, permease protein |
|---|
| Protein accession | YP_696173 |
|---|
| Protein GI | 110801260 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0444419 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAT TTTCTTACAA AAATAAGAAA TTAATATTTT TATCTTCAGT TATACTTTTT
ATTTTATGGC AATTAGCTAG TATGATTATA GGGAGTGAGG TAATATTACC TTCTCCCTAT
TTAACGTTTA AGGGGTTAAT TGAAGTAATA AAATCAAATG ATTTTTTCAA AATAATAATA
AGTACTTTAG GAAGAACTTT CATAAGTTTT ACCTTAGCCT TAGTTATTGC TTTATTTTTA
GGTGTGTTTA GTGCTTTTAA TAAATATGTT TATAATTTTA TGATACCTAT ATTAAATGTA
ATGAGATCTT TACCAACAAT AGGCTTTATA ATACTTGCTT TAATTTGGTT AAGTCAAGGC
ATAGCTCCTA TATTAGTTGG GTTTGTAATG AGTTTTCCTA TATTTTATGA TGCCATAATA
GGAGCTATAT TAAATATAGA CAAAAATATA CTAGAGATGG CTAAGGTTTA TGAGATTGGT
ATGGGTAATT TAATAAAGAA TATATATTTG CCAAGCATAA GTTTTGCCAT ATGTAGAATA
ATGGTTTCAA CCTTTTCCCT AACTATGAAG TTAGTAGTTG GAGGAGAAGT TATTGGACAA
CCTAAATATG GTATAGGAAC GGCACTTTTT GTGGAAAAGA ATTATTTAAA TACTAATATG
GTATTTGCAT GGATAATAGT AGTAATTATT ATAGGAATAA TTTTTTCTTT AATACAAAAA
ACTATTGATG GTAGAGTTTT TAGGTGGATG AAATAA
|
|---|
| Protein sequence | MKKFSYKNKK LIFLSSVILF ILWQLASMII GSEVILPSPY LTFKGLIEVI KSNDFFKIII
STLGRTFISF TLALVIALFL GVFSAFNKYV YNFMIPILNV MRSLPTIGFI ILALIWLSQG
IAPILVGFVM SFPIFYDAII GAILNIDKNI LEMAKVYEIG MGNLIKNIYL PSISFAICRI
MVSTFSLTMK LVVGGEVIGQ PKYGIGTALF VEKNYLNTNM VFAWIIVVII IGIIFSLIQK
TIDGRVFRWM K
|
|---|
| |