| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1731 |
|---|
| Symbol | |
|---|
| ID | 4201928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 1952947 |
|---|
| End bp | 1954602 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638082603 |
|---|
| Product | SulP family sulfate permease |
|---|
| Protein accession | YP_696167 |
|---|
| Protein GI | 110801327 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.281721 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAAC CAAAGTTAAT TTCTCTTTTA GATGATAAAG AGAACGGATT TTCAAAAGAA
CAATTTTTTA AAGATTTAAT CGCTGGGATA ATAGTTGCTA TTATAGCACT TCCCCTATCT
ATTGCATTAG GTATTTCTTC AGGGGTGTCT CCTGAGAAAG GATTAATAAC TGCAATCATA
GCTGGATTTA TAATTTCATT ATTAGGAGGA AGTAGAGTTC AAATTGGTGG GCCTACTGGT
GCCTTTGTTG TTATAGTATT TGGTATTATA CAAAATCATG GAGTTGATGG ACTAATAATT
GCCACATTTA TGGCTGGTAT TATTCTTGTT TTATTTGGTT TATTACGATT TGGTAGCTTA
ATAAAATACA TACCTTATCC AATAACGGTA GGATTTACTT CTGGTATAGC TGTAACTCTT
TTCTCAACAC AGGTTAAGGA TTTTTTAGGA CTTTCAATGA CTAAAACCCC TTCTGAGTTT
ATACCTAAGT GGGAAGCTTA CATATCTCAT ATGAACACTA CAAACCTTTA TACATTAGCT
ATAGGATTAC TAGCACTTAT TATTTTAATC TTTTGGCCAA AAATAAATAA AAAGATTCCA
GGATCTTTAA TAGCTTTAAT AGTAACAACT TTAGTAGTAT TTATATTTAA TTTACCAGTT
GCAACAATAG GAAGTCAATT TGGTAAAATA AGCTCAAATA TTCCAATGCC TCATATTCCT
AACCTAAATC TTAATACATT AAAAGCATTA ATCGGACCTG CTTTTACAAT AGCGCTTTTA
GGTGGAATTG AATCTTTATT ATCTGCTGTT GTTTCAGATG GTATGATTGG AGACAAGCAT
AATTCAAATG CAGAACTTAT AGCACAAGGA ATAGCTAATA TGGGTTCTTC TCTATTTGGA
GGAATTCCTG CTACTGGAGC AATTGCTAGA ACTGCTGCCA ATGTTAAAAA TGGGGGAAGA
ACTCCTATTT CGGGTATAGT TCATTCAATA ACTTTATTAC TTATAATGCT TGTATTTATG
CCTCTTGCTA AATTCATTCC ATTAACTACT TTATCAGCAA TATTAATAAT TGTTTCATAT
AACATGAGTG AATGGAGAAC TTTTAAAGCA ATACTTAAGG CTCCTAAAAG TGATATAGCT
ATATTACTAA CAACATTTTT CTTAACAGTA TTATTTGATT TAGTAATTGC TATAGGAATA
GGAATGGTAG TTTCTATGTG CTTATTTATG AGAAGAGTTG CTACTTCTAT AGAAGTAAAT
GAATTAAATG AAAGTGACTG TTCTGATAAA TCTAATATAG ATACTGATAT GGAAAATCTT
AAGGTTGGAG AAAATGTCTT AGTCTATGAT ATAAGAGGTC ACCTTTTCTT TGGTGCTGTA
GATACATTTA TGAATACAAT GAAGGAAATA AATGATGATG CAAAGGTTCT TGTTTTAAGA
ATGAGACATA CTAAGACTTT AGATGTTACA GGATATAAAC AAATAAAAAA TATAGCTCTA
AGTTGTAAGT CTCGTAATAT GACTTTAATA ATATCTGAAT TACAAGAACA GCCAAAAAAA
GTTATGAGAC TTATGGGATT TATAGATACT TTAGGTGAAG ATCACTTTGC TACAAATTTT
GATGAAGCTT TAGAAAAAGC AAATTCTTTA ATTTAA
|
|---|
| Protein sequence | MYKPKLISLL DDKENGFSKE QFFKDLIAGI IVAIIALPLS IALGISSGVS PEKGLITAII
AGFIISLLGG SRVQIGGPTG AFVVIVFGII QNHGVDGLII ATFMAGIILV LFGLLRFGSL
IKYIPYPITV GFTSGIAVTL FSTQVKDFLG LSMTKTPSEF IPKWEAYISH MNTTNLYTLA
IGLLALIILI FWPKINKKIP GSLIALIVTT LVVFIFNLPV ATIGSQFGKI SSNIPMPHIP
NLNLNTLKAL IGPAFTIALL GGIESLLSAV VSDGMIGDKH NSNAELIAQG IANMGSSLFG
GIPATGAIAR TAANVKNGGR TPISGIVHSI TLLLIMLVFM PLAKFIPLTT LSAILIIVSY
NMSEWRTFKA ILKAPKSDIA ILLTTFFLTV LFDLVIAIGI GMVVSMCLFM RRVATSIEVN
ELNESDCSDK SNIDTDMENL KVGENVLVYD IRGHLFFGAV DTFMNTMKEI NDDAKVLVLR
MRHTKTLDVT GYKQIKNIAL SCKSRNMTLI ISELQEQPKK VMRLMGFIDT LGEDHFATNF
DEALEKANSL I
|
|---|
| |