| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1728 |
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| Symbol | |
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| ID | 4201831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1950704 |
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| End bp | 1951420 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082600 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_696164 |
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| Protein GI | 110800399 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000179283 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT TTGTTTTTTT ACTAATTACA TTAATATTTT CTTTTTCAGC CTTAGCTACC
TCTTCAAAAC CTATTAAAGC AGCTGAATTA GAAGAAAGCA CAAAAAAAAT ATTTTTAACC
TTTGATGATG GCCCTGGTGG TAAGGTTACA GAAGAAATTT TAAACACCCT TAAAGAAAAT
GATGTAAAAG CTACATTTTT TTTAATAGGA GAACTAGTAG AAAAACACCC TGATTTAGTT
AAAAGAATGA ATGATGAGGG TCATTCCATA GGAGTACACA CCTTTACCCA TGAGAGAAAT
AAAATTTACA GAAATGACTC CTCATTCCTA GAAGAAAACT TAAAAGCTCA AGAATCCATA
GAAAAAGTTA TTGGAAAGAA AGTATTTTCT CTTAGATTTC CATTTGGTTC TAATAATAGT
ACATATACCT TAAAAAAATC CTTAGTAGAC TCCTTACATA AACAAGGCTT TAGAATATAT
GATTGGACGG TAGATAGCAC TGATGCTCTT AATCCAAACC TAAGCCCAAG TTCTATAGTT
CAAAAGTCAA TTTCTAATTC TGATTATATT GTACTTTTAA TGCATTGTGG ATATTCTAAT
AATAATTCTG CTAAAGCATT GCCATCAATC ATAAAACATT TTAAATCAGC TGGATATAGC
TTTGAAGTAA TAGATGAAAG TACTCCTGAA ATTTATAGAT TAAAAAATAA ATGTTGA
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| Protein sequence | MKKFVFLLIT LIFSFSALAT SSKPIKAAEL EESTKKIFLT FDDGPGGKVT EEILNTLKEN
DVKATFFLIG ELVEKHPDLV KRMNDEGHSI GVHTFTHERN KIYRNDSSFL EENLKAQESI
EKVIGKKVFS LRFPFGSNNS TYTLKKSLVD SLHKQGFRIY DWTVDSTDAL NPNLSPSSIV
QKSISNSDYI VLLMHCGYSN NNSAKALPSI IKHFKSAGYS FEVIDESTPE IYRLKNKC
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