Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1704 |
Symbol | |
ID | 4201137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1926235 |
End bp | 1927206 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082576 |
Product | hypothetical protein |
Protein accession | YP_696140 |
Protein GI | 110798859 |
COG category | [S] Function unknown |
COG ID | [COG3339] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0800873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAAATTT CAAATGTAGA TATAAAATTA AATTCAGATG ACTTAATGAG CTTTATTAAT GATTTTGTGA AAATTAAAGG TTTAGAAATA AAAAGCTTAA AAATAAACAA TAGTATAGAA GTGGAAGGCG TATTCAAAAA AGTTCTTGCT TTAGGTTTTA AGGCAACCTT GGATATTTTA GGAGTAGAAG GGGATAATCT TGTTATAGAA TTTTCAAAAG CTAAACTTAT GAGTGTTGGA ATTTTAAAGC CTTTTAGAAA AATAGGTCTA AAGATAGCTT TAAAAGGTTT TAAAAATCAG GGGATATTAG TTAAAGAGGA TAAAATACTT GTAGGTTATA AGAAAATACT AGGTAATATA CCTTTCTTAA ATTTAGATTT TAAGGAATTA AAAATTCAAG GAGAGGTTTT AAATATTGGC TTAGAAAAAA TAGATGTAGA GCTTTCAAAG ATTAAGGAAC CTGTTTTAGA AATAGAAGTA AGAGATGATA TTGAAGAAGA GGAAAAGACA GATGATTACA TAATGAGCAT TGATGTACAA AAAGTTGAGG ACATGTATAC AAGTAGCAGA GAGTATGTGG TTAATCATAT TCCAGATAAA GCTAAAGATT ATAAGGATTA TATTATGTTC TTACCAGATA TAGTAGCTTT AATATTTAGA CTTTTAAAAG ATAATAGAGT TCCTATGAAG ACTAAGGCTG TAGTAGGTGC CTCTTTAGGA TATGTAGTTT GTCCATTTGA TATATTACCA GATAAAATAC CTTTTGTAGG TGCTTTAGAT GATTTAAGTG TAATTTTCTT TGCTTTAAAT AGAATAATAA ATGATGTAGA CATAAATGTT ATATTAGAAA ATTGGCAAGG AGAAAATGAA TTTGTAGTTA TTTTAAGAAA GACTGTAGAA TTCTTTAGTG GATTTACAGG TGCTAATAAT TTAGATAATA TATATGAAGT CATAGATGTA ATAACTAATT AA
|
Protein sequence | MQISNVDIKL NSDDLMSFIN DFVKIKGLEI KSLKINNSIE VEGVFKKVLA LGFKATLDIL GVEGDNLVIE FSKAKLMSVG ILKPFRKIGL KIALKGFKNQ GILVKEDKIL VGYKKILGNI PFLNLDFKEL KIQGEVLNIG LEKIDVELSK IKEPVLEIEV RDDIEEEEKT DDYIMSIDVQ KVEDMYTSSR EYVVNHIPDK AKDYKDYIMF LPDIVALIFR LLKDNRVPMK TKAVVGASLG YVVCPFDILP DKIPFVGALD DLSVIFFALN RIINDVDINV ILENWQGENE FVVILRKTVE FFSGFTGANN LDNIYEVIDV ITN
|
| |