Gene CPF_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1704 
Symbol 
ID4201137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1926235 
End bp1927206 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content27% 
IMG OID638082576 
Producthypothetical protein 
Protein accessionYP_696140 
Protein GI110798859 
COG category[S] Function unknown 
COG ID[COG3339] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0800873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAATTT CAAATGTAGA TATAAAATTA AATTCAGATG ACTTAATGAG CTTTATTAAT 
GATTTTGTGA AAATTAAAGG TTTAGAAATA AAAAGCTTAA AAATAAACAA TAGTATAGAA
GTGGAAGGCG TATTCAAAAA AGTTCTTGCT TTAGGTTTTA AGGCAACCTT GGATATTTTA
GGAGTAGAAG GGGATAATCT TGTTATAGAA TTTTCAAAAG CTAAACTTAT GAGTGTTGGA
ATTTTAAAGC CTTTTAGAAA AATAGGTCTA AAGATAGCTT TAAAAGGTTT TAAAAATCAG
GGGATATTAG TTAAAGAGGA TAAAATACTT GTAGGTTATA AGAAAATACT AGGTAATATA
CCTTTCTTAA ATTTAGATTT TAAGGAATTA AAAATTCAAG GAGAGGTTTT AAATATTGGC
TTAGAAAAAA TAGATGTAGA GCTTTCAAAG ATTAAGGAAC CTGTTTTAGA AATAGAAGTA
AGAGATGATA TTGAAGAAGA GGAAAAGACA GATGATTACA TAATGAGCAT TGATGTACAA
AAAGTTGAGG ACATGTATAC AAGTAGCAGA GAGTATGTGG TTAATCATAT TCCAGATAAA
GCTAAAGATT ATAAGGATTA TATTATGTTC TTACCAGATA TAGTAGCTTT AATATTTAGA
CTTTTAAAAG ATAATAGAGT TCCTATGAAG ACTAAGGCTG TAGTAGGTGC CTCTTTAGGA
TATGTAGTTT GTCCATTTGA TATATTACCA GATAAAATAC CTTTTGTAGG TGCTTTAGAT
GATTTAAGTG TAATTTTCTT TGCTTTAAAT AGAATAATAA ATGATGTAGA CATAAATGTT
ATATTAGAAA ATTGGCAAGG AGAAAATGAA TTTGTAGTTA TTTTAAGAAA GACTGTAGAA
TTCTTTAGTG GATTTACAGG TGCTAATAAT TTAGATAATA TATATGAAGT CATAGATGTA
ATAACTAATT AA
 
Protein sequence
MQISNVDIKL NSDDLMSFIN DFVKIKGLEI KSLKINNSIE VEGVFKKVLA LGFKATLDIL 
GVEGDNLVIE FSKAKLMSVG ILKPFRKIGL KIALKGFKNQ GILVKEDKIL VGYKKILGNI
PFLNLDFKEL KIQGEVLNIG LEKIDVELSK IKEPVLEIEV RDDIEEEEKT DDYIMSIDVQ
KVEDMYTSSR EYVVNHIPDK AKDYKDYIMF LPDIVALIFR LLKDNRVPMK TKAVVGASLG
YVVCPFDILP DKIPFVGALD DLSVIFFALN RIINDVDINV ILENWQGENE FVVILRKTVE
FFSGFTGANN LDNIYEVIDV ITN