| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1688 |
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| Symbol | hemC |
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| ID | 4202471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1910677 |
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| End bp | 1911552 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082562 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_696126 |
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| Protein GI | 110800724 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.814141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAA TAATAGCGAC TAGAAAAAGT AAGTTAGCAC AAGTGCAAAC TGAAAAAGTT
ATGGAACTTT TAAAGGAAAA AGAAAATGTA GATAGTAAGA AGCTTTTAGT TATGACAGAA
GGTGATAGAA GACTAGATGT TTCATTAAAT AAAATAGGTG GCAAGGGTCT ATTTGTAAAG
GAAATAGAAT TAGCTCTTTT AAATAAAGAA GCTCATGGAG CAGTTCATAG TATGAAAGAT
GTTCCTTTTG AACTTCCTAG TGAATTTGAG CTTGTTGCAA TGCCAGAGAG AGAAGATATA
AGAGATGCCT TTGTATCTTT AAATGGATCA ACTTTATCTA ACTTAAGAAA AGGAGCTAGA
ATCGGAACTA GCAGTATAAG ACGTGCAGAG CAGTTAAAGT TATTTAGAGA TGACTTAGAG
ATTGTTCCAA TTAGAGGTAA TGTTCAAACT AGAATAAAAA AAATAACTGA AGAAAATTTA
GATGGAATAA TTTTAGCGGC AGCAGGATTA AAAAGACTTG GTATGGAAGA TGTAATAAGT
GATTATTTTG ATCCAAAGGT ATTTTTACCT GCTATTGGTC AAGGAGCTTT AGGAATAGAG
TGCTTAAAAG GTGGAGAATT TAATGACTAT TTTAAAGCTT TAGATAGCAA AGAGGTTAGA
ACTACTGTTG AGGCTGAAAG AAGTTTTATG AAGGTATTAA ACGGAGGATG TCATAGTCTT
ATAGGTGCTT ATTCAGAGGT TAAAGATAAT GACTTATATA TGATAGGTAC ATTTACTGTA
AATAATAGAA TAGTTAAAAA AGATATATTA GGAAATAAAG AAGATAATAT ATTATTAGGA
AAAAAACTTG CAGAAAAAAT ATTAGGAGAG GTATAG
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| Protein sequence | MELIIATRKS KLAQVQTEKV MELLKEKENV DSKKLLVMTE GDRRLDVSLN KIGGKGLFVK
EIELALLNKE AHGAVHSMKD VPFELPSEFE LVAMPEREDI RDAFVSLNGS TLSNLRKGAR
IGTSSIRRAE QLKLFRDDLE IVPIRGNVQT RIKKITEENL DGIILAAAGL KRLGMEDVIS
DYFDPKVFLP AIGQGALGIE CLKGGEFNDY FKALDSKEVR TTVEAERSFM KVLNGGCHSL
IGAYSEVKDN DLYMIGTFTV NNRIVKKDIL GNKEDNILLG KKLAEKILGE V
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