| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1687 |
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| Symbol | hemD |
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| ID | 4202350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1909190 |
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| End bp | 1910668 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082561 |
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| Product | uroporphyrinogen-III methyltransferase/synthase |
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| Protein accession | YP_696125 |
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| Protein GI | 110800584 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0805383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA AAGCATATAT AATAGGGGCA GGTCCTGGAG ATGAAGAGTT ATTAACACTT
AAAGCAATAA ATGCATTACA AAAATGCACA GCTGTCTTAT ATGATAGATT AGTTGGGAAC
AATATACTTA ATTATTTAAA TGATGACTGT GAGATTTACT ATTGTGGAAA AGAGCCAGGA
TGCCATTATA AAACACAGGA AGAGATAAAT GAAAGTATAG TTGAGCTTGC TAAAAAAGGT
CATGTTGTTG GTAGAGTAAA AGGAGGAGAT CCATATGTTT TTGGAAGAGG TGGAGAAGAA
GTATTAGCCT TAGTAGAAGA AAACATACCT TTTGAAGTTA TTCCAGGGGT TACTTCACCT
ATTTCTGTTT TGAATTATGC AGGAATACCA ATAACACATA GAGGATTAGC ACAGAGTTTT
CATATTGTAA CAGGAATGTC AGCAAGAACT TTAAATGTAA ATTGGAAAGC TTTATCAAAA
GAAAATGGAA CCTTAGTATT TATGATGGGA CTTTCAAATT TAGAGACAAT TGTTGAGAAA
CTTTTAGAAA ATGGTAAAGA TATAGAAACT CCTTGTGGAG TAGTAATGAG AGGAACAACT
TCAAAGCAAA GAAAGGTTAT TGGAACATTA GAAAATATAT GTAAAAAGGT TAGAGAAGCT
AAGTTAGAGT CACCTTGTAT AATAGTTGTT GGAGATGTTG TCTCATTAAA TGAAAAACTT
TCATGGTATG AAAATTTACC TCTATTTGGA GCTAATATTT GCTTAACAAG ATCTAAGGAA
CAATCTAAAG AGATTAAGTG GAAATTAAAA GAGTTAGGTG CAGAAGTAAC AGAAATAAAC
TCTATAAAAA TAAAAGAAAC TGCTTATAAT TTAGATGAAT ATATTAATAC TTTAGAAAAA
TATGATCATA TAGTATTTAC TTCAGTAAAT GCTGTTAATG TATTCTTTGA TTATTTAGTA
AAAAATAGAG TTGATATAAG AAAAATAAAA GCAGATTTTG CTGTACTAGG AAAAGCAACT
AAAAAAGCTT TAATAGCTAG AGGGATTGTG CCAAGCATAA TGGCTCATTC ATTTACAGCA
GAAGGTTTAT TTGAAGTTTT AAAAGATAAT ATTAAAGAAG GAGAAGAGGT ATTAATTCCA
TGTTCTTCTT TAAGCAGAGA ATATTTGTTT GATAATTTAG CTTCTTTAGG AGCAAAATGT
CATAGAGTTA ATATTTATGA TACTATATGC GGAGATGTTA AAAATCCAAG AGCTTTCAAG
GAAGTTGATA TGGTATTATA CACAAGTCCT TCAACGGTTA AAAACATGAT TGATATGATT
GGACTTGAAG CTCTTAAAGA GAAAGTAAGC ATAGCTATAG GACCTATAAC TTTAAAAGCT
TTAAATGAAA GTGGAATTGA AGGAAAAATG TGCAAAACAC ATTGTGGAGA TGGATTTTTA
AGTGAAATTG AGGGTATATG GCAAGAGGTT AAAAAATAA
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| Protein sequence | MSKKAYIIGA GPGDEELLTL KAINALQKCT AVLYDRLVGN NILNYLNDDC EIYYCGKEPG
CHYKTQEEIN ESIVELAKKG HVVGRVKGGD PYVFGRGGEE VLALVEENIP FEVIPGVTSP
ISVLNYAGIP ITHRGLAQSF HIVTGMSART LNVNWKALSK ENGTLVFMMG LSNLETIVEK
LLENGKDIET PCGVVMRGTT SKQRKVIGTL ENICKKVREA KLESPCIIVV GDVVSLNEKL
SWYENLPLFG ANICLTRSKE QSKEIKWKLK ELGAEVTEIN SIKIKETAYN LDEYINTLEK
YDHIVFTSVN AVNVFFDYLV KNRVDIRKIK ADFAVLGKAT KKALIARGIV PSIMAHSFTA
EGLFEVLKDN IKEGEEVLIP CSSLSREYLF DNLASLGAKC HRVNIYDTIC GDVKNPRAFK
EVDMVLYTSP STVKNMIDMI GLEALKEKVS IAIGPITLKA LNESGIEGKM CKTHCGDGFL
SEIEGIWQEV KK
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