Gene CPF_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1686 
SymbolhemB 
ID4202556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1908168 
End bp1909133 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content32% 
IMG OID638082560 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_696124 
Protein GI110799053 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGA GAGGAAGAAG ACTTAGAATA AATAAGGAAA TGAGAGACCT TGTTAGAGAA 
AATATTTTAA CAGCAAATGA CTTTATATTT CCTATATTTG TAGTTGAAGG AAACAACATA
AAAAAGGAGA TAAGTTCTCT GCCAGGAAAC TATCATGTAT CTTTAGATAG ATTAAATGAA
ATAGTTGATG AAGTGGTAGC TTTAAATATA AAAGGTGTAA TTATATTTGG TCTTCCAGAA
CATAAGGATG CTTGTGGATC AGAGGCATAT TCTGATAATG GAATTGTTCA AAAGGCTATT
AGAAAATTAA GAGAAGATTA TGAGAACTTA TTAGTAATAA CTGATGTTTG TATGTGTGAA
TATACTAGTC ATGGTCATTG TGGAATAATA GAAGGAAAAG ATGTAGATAA TGACAAAACT
TTAAGTTTCT TAGATAAAAT AGCAGTTTCA CACGCTAAGG CTGGTGCTCA TATGGTAGCT
CCTTCAGATA TGATGGATGG AAGAATATTA TCTATGAGAA ATGCTTTAGA TGAAGCTGGA
TTTGTTAATG TTGGAATAAT GAGTTATTCT GCAAAATATT GCTCAGCTTT CTATGGTCCT
TTCAGAGAAG CTGCTAATTC AGCACCACAA TTTGGAGATA GAAAAACCTA TCAAATGGAT
CCTGCAAACT CAAGAGAAGC CATAAAAGAA GTAGAGCAAG ACATAGAAGA GGGTGCAGAT
ATAGTTATGG TTAAACCTGC CTTATCATAT TTAGATATTG TTAAGGAAGT AAGAAATAAA
GTAGATGTAC CAGTTTGTGT TTATAATGTA AGTGGTGAAT TTGCTATGGT TAAGGCAGCG
GCTAAACTTG GACTTATAAA CGAAAAACAA GTAGCTTTAG AAATGCTTTT ATCAATGAAA
AGAGCAGGAG CAGATATGAT AATAACTTAT TATGCTATAG AAGCTGCTAA ATGGTTACAA
GAATAG
 
Protein sequence
MIKRGRRLRI NKEMRDLVRE NILTANDFIF PIFVVEGNNI KKEISSLPGN YHVSLDRLNE 
IVDEVVALNI KGVIIFGLPE HKDACGSEAY SDNGIVQKAI RKLREDYENL LVITDVCMCE
YTSHGHCGII EGKDVDNDKT LSFLDKIAVS HAKAGAHMVA PSDMMDGRIL SMRNALDEAG
FVNVGIMSYS AKYCSAFYGP FREAANSAPQ FGDRKTYQMD PANSREAIKE VEQDIEEGAD
IVMVKPALSY LDIVKEVRNK VDVPVCVYNV SGEFAMVKAA AKLGLINEKQ VALEMLLSMK
RAGADMIITY YAIEAAKWLQ E