Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1686 |
Symbol | hemB |
ID | 4202556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1908168 |
End bp | 1909133 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082560 |
Product | delta-aminolevulinic acid dehydratase |
Protein accession | YP_696124 |
Protein GI | 110799053 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAGA GAGGAAGAAG ACTTAGAATA AATAAGGAAA TGAGAGACCT TGTTAGAGAA AATATTTTAA CAGCAAATGA CTTTATATTT CCTATATTTG TAGTTGAAGG AAACAACATA AAAAAGGAGA TAAGTTCTCT GCCAGGAAAC TATCATGTAT CTTTAGATAG ATTAAATGAA ATAGTTGATG AAGTGGTAGC TTTAAATATA AAAGGTGTAA TTATATTTGG TCTTCCAGAA CATAAGGATG CTTGTGGATC AGAGGCATAT TCTGATAATG GAATTGTTCA AAAGGCTATT AGAAAATTAA GAGAAGATTA TGAGAACTTA TTAGTAATAA CTGATGTTTG TATGTGTGAA TATACTAGTC ATGGTCATTG TGGAATAATA GAAGGAAAAG ATGTAGATAA TGACAAAACT TTAAGTTTCT TAGATAAAAT AGCAGTTTCA CACGCTAAGG CTGGTGCTCA TATGGTAGCT CCTTCAGATA TGATGGATGG AAGAATATTA TCTATGAGAA ATGCTTTAGA TGAAGCTGGA TTTGTTAATG TTGGAATAAT GAGTTATTCT GCAAAATATT GCTCAGCTTT CTATGGTCCT TTCAGAGAAG CTGCTAATTC AGCACCACAA TTTGGAGATA GAAAAACCTA TCAAATGGAT CCTGCAAACT CAAGAGAAGC CATAAAAGAA GTAGAGCAAG ACATAGAAGA GGGTGCAGAT ATAGTTATGG TTAAACCTGC CTTATCATAT TTAGATATTG TTAAGGAAGT AAGAAATAAA GTAGATGTAC CAGTTTGTGT TTATAATGTA AGTGGTGAAT TTGCTATGGT TAAGGCAGCG GCTAAACTTG GACTTATAAA CGAAAAACAA GTAGCTTTAG AAATGCTTTT ATCAATGAAA AGAGCAGGAG CAGATATGAT AATAACTTAT TATGCTATAG AAGCTGCTAA ATGGTTACAA GAATAG
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Protein sequence | MIKRGRRLRI NKEMRDLVRE NILTANDFIF PIFVVEGNNI KKEISSLPGN YHVSLDRLNE IVDEVVALNI KGVIIFGLPE HKDACGSEAY SDNGIVQKAI RKLREDYENL LVITDVCMCE YTSHGHCGII EGKDVDNDKT LSFLDKIAVS HAKAGAHMVA PSDMMDGRIL SMRNALDEAG FVNVGIMSYS AKYCSAFYGP FREAANSAPQ FGDRKTYQMD PANSREAIKE VEQDIEEGAD IVMVKPALSY LDIVKEVRNK VDVPVCVYNV SGEFAMVKAA AKLGLINEKQ VALEMLLSMK RAGADMIITY YAIEAAKWLQ E
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