| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1681 |
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| Symbol | clpB |
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| ID | 4202698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1898873 |
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| End bp | 1901473 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082555 |
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| Product | clpB protein |
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| Protein accession | YP_696119 |
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| Protein GI | 110798650 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAG ATAAAATGAC ATTAAGAGTA CAACAAAGCT TAAATGATGC TTATGAAATA
GCAGTTAAAT ATAATAATCA ACAATTAGAT ATAATTCACT TATTTTCAGC ATTAGTAAAT
CAAAAAGATG GTTTAATTCC TAATATATTT GAAAAAATGG GTGTTAATAT AGATTCATTA
AAAAGAGACA TTCATGTTCA AATAGATAGG ATGCCTAAGG TTTTAGGAGA AGCGGCACAA
TCATCAGGGG TTACTGCTAC AAGAAGAATA AATGAAGTAT TAATAAAGGC AGAAGAAATT
TCAAAACAAT TTGAAGATTC ATATATAAGT GTTGAGCATG TAATGCTTGC AATGATAGAT
ATAGATAAAA ATGGAGCTGT AGGAGAAATC TTAAGAAAAA ATAATATAAC TAAAGATGGA
TTCCTAAAGG TTTTAAATGA AGTTAGAGGA AGTCAAAGAG TAGATTCACA AGATCCAGAA
GGAACTTATG AAGCTTTAGA TAAATACGGT ACTAATTTAA TAGAACTTGT AAAACAACAT
AAATTAGATC CTGTTATAGG AAGAGATGAA GAAATAAGAA GAGCTGTTAG AATTCTTTCA
AGAAAAACTA AGAACAATCC AATACTAATA GGAGAACCTG GAGTTGGTAA AACTGCTATA
GTTGAAGGAT TAGCAGAAAG AATTGTAAGA GGAGATGTAC CAGAAGGACT AAAGGATAAG
GTAATTATCT CATTAGATAT GGGTGCATTA ATAGCTGGTG CTAAATATAG AGGAGAATTT
GAAGAAAGAT TAAAAGCTGT TTTAAAAGAA GTTCAAAGTT CAGAAGGAAA AATACTTTTA
TTCATAGATG AAATTCATAC AATTGTAGGC GCTGGTAAAA CAGATGGTGC AATGGATGCA
GGAAACTTAA TTAAACCAAT GCTTGCAAGA GGAGAACTTC ACTGCATAGG AGCTACAACT
TTTGACGAAT ATAGACAATA TATAGAAAAG GATAAAGCTC TAGAGAGAAG ATTCCAACCT
GTAATAGTTG AAGAACCAAC AGTTGAAGAA ACTGTATCTA TTTTAAGAGG ATTAAAAGAA
AGATTTGAAA TTCACCATGG AATTAGAATC CATGACTCAG CAATAGTAGC TGCTGCAAAA
CTTTCTCATA GATATATTCA AGATAGATAT TTACCAGATA AGGCTATAGA TTTAATAGAT
GAAGCTGGTG CTATGATAAG AAGTGAAATA GATTCTCTTC CAACTGAATT GGATATTATA
AGAAGAAAGA TCTTAATGCT TGAAACTGAA AAGGAAGCTT TATCAAAAGA AAATGATGAT
GCATCTAAGG AAAGATTAGT TGCTTTAGAA AAAGAGCTTG CAGAGCTTCA AGATAAAAAT
GATGAGATGA CAATTAAATA TGAAAAAGAA AAATCTCATA TTTCAGCAGT TAGAGACTTA
AAGGCTGAGT TAGATGAAGC AAGAGGATTA GCTGAAAAAT ATGAAAGAGA ATATGATTTA
AATAAAGTTG CAGAACTTAA ATATGGAAAA ATTCCAGAAC TTGAACGTAA AATAAAAGAA
CAAGAAGCAA GTATGGAAAA AGATAATGAA AATGCTTTAT TAAAAGAAGA GGTTACTGAA
AATGAAATTT CAGAAATAAT CTCAAAATGG ACTGGAATTC CTGTTACAAA ACTAGTTGAA
AGTGAAAGAG AAAAACTTTT AAGACTAGAA GAAGAATTAA GAGAAAGAGT AATAGGTCAA
GATGAGGCTA CAACTGCAGT TGCTAATGCT GTAATAAGAG CAAGAGCTGG TCTTAAAGAT
GAAAGAAAAC CAATAGGATC ATTTATATTC TTAGGACCTA CTGGAGTTGG TAAAACAGAA
CTTGCAAAAA CTTTAGCTAG AAATTTATTT GATAGCGAAG ACAATATAGT AAGAATAGAT
ATGTCTGAAT ATATGGAAAA ACATGCAGTA TCTAGATTAA TAGGACCTCC TCCAGGATAT
GTAGGATATG AAGAAGGGGG ACAATTAACA GAGGCTGTTA GAAGAAACCC ATATTCAGTA
ATATTATTTG ATGAAATAGA AAAAGCACAT GATGATGTAT TTAACTTATT CCTTCAAATA
TTAGATGATG GTAGATTAAC AGATAATAAA GGTAAAACTG TTGATTTCAA AAACACTATA
ATAATTATGA CTTCTAACAT AGGTAGTGGA TACTTATTAG AAAATAAATC TAATGAAGGT
ATAGAAGATG ATATTAGAGA AAATGTTATG AATGAAATGA AGTTAAGATT CAAACCAGAA
TTCTTAAACA GAGTAGATGA TATCATAATG TTTAGACCTT TAAGCAGTGA AGGAATTAAG
AAAATAATAG ATATCTTCTT AAGAGATGTT GAAAATAGAT TAAGAGAAAG AAATATAACT
CTTGAAGTTA CTGATGGAGC TAAGGAAATA TTAGCTGAAG AAGGATATGA TCCAGTATAT
GGAGCTAGAC CATTAAAGAG ATATATAAGC AATGTCTTAG AAACTGAAAT AGCTAAGAAG
ATAATTGCAG GAGAAATTTA TGATGGATCT GTTGCTTTAA TAGATGGAGT AGATGGAAAA
ATTATAGTTT CTAGAAAATA A
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| Protein sequence | MNADKMTLRV QQSLNDAYEI AVKYNNQQLD IIHLFSALVN QKDGLIPNIF EKMGVNIDSL
KRDIHVQIDR MPKVLGEAAQ SSGVTATRRI NEVLIKAEEI SKQFEDSYIS VEHVMLAMID
IDKNGAVGEI LRKNNITKDG FLKVLNEVRG SQRVDSQDPE GTYEALDKYG TNLIELVKQH
KLDPVIGRDE EIRRAVRILS RKTKNNPILI GEPGVGKTAI VEGLAERIVR GDVPEGLKDK
VIISLDMGAL IAGAKYRGEF EERLKAVLKE VQSSEGKILL FIDEIHTIVG AGKTDGAMDA
GNLIKPMLAR GELHCIGATT FDEYRQYIEK DKALERRFQP VIVEEPTVEE TVSILRGLKE
RFEIHHGIRI HDSAIVAAAK LSHRYIQDRY LPDKAIDLID EAGAMIRSEI DSLPTELDII
RRKILMLETE KEALSKENDD ASKERLVALE KELAELQDKN DEMTIKYEKE KSHISAVRDL
KAELDEARGL AEKYEREYDL NKVAELKYGK IPELERKIKE QEASMEKDNE NALLKEEVTE
NEISEIISKW TGIPVTKLVE SEREKLLRLE EELRERVIGQ DEATTAVANA VIRARAGLKD
ERKPIGSFIF LGPTGVGKTE LAKTLARNLF DSEDNIVRID MSEYMEKHAV SRLIGPPPGY
VGYEEGGQLT EAVRRNPYSV ILFDEIEKAH DDVFNLFLQI LDDGRLTDNK GKTVDFKNTI
IIMTSNIGSG YLLENKSNEG IEDDIRENVM NEMKLRFKPE FLNRVDDIIM FRPLSSEGIK
KIIDIFLRDV ENRLRERNIT LEVTDGAKEI LAEEGYDPVY GARPLKRYIS NVLETEIAKK
IIAGEIYDGS VALIDGVDGK IIVSRK
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