Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1678 |
Symbol | pcp |
ID | 4201764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1896336 |
End bp | 1896977 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082552 |
Product | pyrrolidone-carboxylate peptidase |
Protein accession | YP_696116 |
Protein GI | 110800778 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.260127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAT TAATTACAGG ATTTGATCCC TTTGGAGGAG AAAGTATAAA CCCAGCTTTA GAAGCTGTTA AAATGATACC AGAAAATATA GAAGGAGCTC AGGTTATTAA ATTAGAAATA CCTACAGTTT TTAGAAAGTC TCTTGAAAAA ATAGAAGAAA AAATAGAGGA AATTAATCCA GATGTAGTTA TTTCTATAGG ACAAGCTGGA GGAAGATTTG GTGTAACTCC AGAAAGAGTA GCTATAAATA TGGATGATGC GAGAATAGAG GATAATGAAG GAAATCAACC AATAGATATT TCTATATATG AAGATGGAGA AAGTGCATAC TTTAGTAATT TACCTATAAA AGCAATGGTT AAGGAAATGG TTGATAATGG AATACCTGCA TCAGTTTCTA ACACAGCTGG AACTTTTGTT TGTAACCATG TTATGTATGG AGTTTTATAC TTAGTAAATA AAAAGTATAA AAATATAAGA GCTGGATTTA TACATGTACC TTATATTCCA ACACAAGTTG TAAATAAACC TAACACACCT TCTATGTCTA TTAATGATAT AGCAAAAGGA TTAGAGCTTA GTATAAAGGC TATAGTTTTA AATGATAATG ATATTAAAAC TGTAGGAGGA GCTGTTTGTT AA
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Protein sequence | MKVLITGFDP FGGESINPAL EAVKMIPENI EGAQVIKLEI PTVFRKSLEK IEEKIEEINP DVVISIGQAG GRFGVTPERV AINMDDARIE DNEGNQPIDI SIYEDGESAY FSNLPIKAMV KEMVDNGIPA SVSNTAGTFV CNHVMYGVLY LVNKKYKNIR AGFIHVPYIP TQVVNKPNTP SMSINDIAKG LELSIKAIVL NDNDIKTVGG AVC
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