Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1674 |
Symbol | |
ID | 4203688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1893491 |
End bp | 1894243 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082548 |
Product | hypothetical protein |
Protein accession | YP_696112 |
Protein GI | 110799810 |
COG category | [S] Function unknown |
COG ID | [COG4684] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.347484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCAG TCTATCAAAC TAGACAAAAA ACAAGAAAAC TAGTAGTTAT TGGTATGCTA TCTGGTATAT CAATATTTCT AGGATTAACA GGATTAGGAT TTATAAATAT TCCACCTGTT AAGGCTACTA TTATGCATAT TCCTGTTATA ATAGGAGCTA TTATTGAGGG TCCTATTGTA GGAGGATTAA TAGGACTAGT TTTTGGATTA TTTTCTATGT ATCAAGCTTT TACGGCGCCA ATGCCAACTA GCTTTATGTT CCTAAATCCT ATTATAGCTT TAGTTCCTAG AATTCTTATA GGTGTGGTAA GTTACTATGT ATATGCATCT ATGATTAAAG GATCTAAAAA GAATTTAAAA GCTACATCAA TTATAAGTTC TCTTATTCTT GGAGTTCTTC TATTTGTAAG TTCTGAAGCT TTAACAGATT CTTTAACTAT ATCAGCTATA ATCGGTGTTT TATTCTTTTT AGCAAGTATG ATTATCATGT TTAAATTTAA ACATAAAAAT AAAGAAGAAG CCCTATCTAT AGGTACAGCT TCCGTAATTG GAACCTTAAC AAATACCATA GGTGTACTTG GCTTAACATA TGTTTTTTAT TTAGAAAGAT ATGCTTCTGC TCTAGGAATA TCTGAACATG CTGCAAAATT AACTTTAGCA GGAATAGGAG TTACAAATGG AATTCCTGAG GCATTTATAT CAGCCTTAAT ATCAATTCCT GTTATATTAG GAGTTAGAAA AATTTTAAGA TAA
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Protein sequence | MNAVYQTRQK TRKLVVIGML SGISIFLGLT GLGFINIPPV KATIMHIPVI IGAIIEGPIV GGLIGLVFGL FSMYQAFTAP MPTSFMFLNP IIALVPRILI GVVSYYVYAS MIKGSKKNLK ATSIISSLIL GVLLFVSSEA LTDSLTISAI IGVLFFLASM IIMFKFKHKN KEEALSIGTA SVIGTLTNTI GVLGLTYVFY LERYASALGI SEHAAKLTLA GIGVTNGIPE AFISALISIP VILGVRKILR
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