Gene CPF_1674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1674 
Symbol 
ID4203688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1893491 
End bp1894243 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content30% 
IMG OID638082548 
Producthypothetical protein 
Protein accessionYP_696112 
Protein GI110799810 
COG category[S] Function unknown 
COG ID[COG4684] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.347484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCAG TCTATCAAAC TAGACAAAAA ACAAGAAAAC TAGTAGTTAT TGGTATGCTA 
TCTGGTATAT CAATATTTCT AGGATTAACA GGATTAGGAT TTATAAATAT TCCACCTGTT
AAGGCTACTA TTATGCATAT TCCTGTTATA ATAGGAGCTA TTATTGAGGG TCCTATTGTA
GGAGGATTAA TAGGACTAGT TTTTGGATTA TTTTCTATGT ATCAAGCTTT TACGGCGCCA
ATGCCAACTA GCTTTATGTT CCTAAATCCT ATTATAGCTT TAGTTCCTAG AATTCTTATA
GGTGTGGTAA GTTACTATGT ATATGCATCT ATGATTAAAG GATCTAAAAA GAATTTAAAA
GCTACATCAA TTATAAGTTC TCTTATTCTT GGAGTTCTTC TATTTGTAAG TTCTGAAGCT
TTAACAGATT CTTTAACTAT ATCAGCTATA ATCGGTGTTT TATTCTTTTT AGCAAGTATG
ATTATCATGT TTAAATTTAA ACATAAAAAT AAAGAAGAAG CCCTATCTAT AGGTACAGCT
TCCGTAATTG GAACCTTAAC AAATACCATA GGTGTACTTG GCTTAACATA TGTTTTTTAT
TTAGAAAGAT ATGCTTCTGC TCTAGGAATA TCTGAACATG CTGCAAAATT AACTTTAGCA
GGAATAGGAG TTACAAATGG AATTCCTGAG GCATTTATAT CAGCCTTAAT ATCAATTCCT
GTTATATTAG GAGTTAGAAA AATTTTAAGA TAA
 
Protein sequence
MNAVYQTRQK TRKLVVIGML SGISIFLGLT GLGFINIPPV KATIMHIPVI IGAIIEGPIV 
GGLIGLVFGL FSMYQAFTAP MPTSFMFLNP IIALVPRILI GVVSYYVYAS MIKGSKKNLK
ATSIISSLIL GVLLFVSSEA LTDSLTISAI IGVLFFLASM IIMFKFKHKN KEEALSIGTA
SVIGTLTNTI GVLGLTYVFY LERYASALGI SEHAAKLTLA GIGVTNGIPE AFISALISIP
VILGVRKILR