Gene CPF_1673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1673 
Symbol 
ID4202342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1892512 
End bp1893168 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content29% 
IMG OID638082547 
ProductHD domain-containing protein 
Protein accessionYP_696111 
Protein GI110800576 
COG category 
COG ID 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGATA AAGAATTATT TGAAATTTTA GAAAAGCATA TTTTAGAGGA TAAGAATCCA 
TCAGAATTTT TAAATTATTT AAAGGAAAAG AAGCTTTTAG AAGGCTCTTT TTTAGAAATA 
TTAAGGGATT TAGAAGAGGT TAAGCAGGAG AAAAAACACC ACCCAGAAGG AAATGTATGG 
ATTCATACCT TGCAAGTTTT AGATGAAGCA GCAAGTTTAA GACAGCTTGC TAATAATAAA 
AGAGAATTTA TGTGGGCAGC TTTACTTCAT GACATTGGAA AGAGAGATAC TACTAAGATG 
AGAAAGGGAA GATGGACTGC TTATGACCAT GATAGGGTAG GAGCGAAACT TTCAAAAGAA 
ATATTAGAAG AGGCTACTGA TAATGAGAAA TTTATAAGTG AAGTAAGCAG TTTAGTTAGA 
TATCATATGT CTTATCTTTA TATAGATAAA AATTTACCTT TTGTAAAACC AGAAGATATG 
GTTAAAAATT CAGATCTTCA TGATATAGCT TTATTGACTT ACTGTGATAG AGTTGGAAGA 
GGGAAAAAGA CTTTAGAAGA TAAGAAAAAA ATATTAGATT CAATAAATAA TTTTATAGTT 
AAAGTCAATG AGAAAACTAA TGGAAACTAT GAAAAATTAT ATGTTTTGGG AAAATAA
 
Protein sequence
MKDKELFEIL EKHILEDKNP SEFLNYLKEK KLLEGSFLEI LRDLEEVKQE KKHHPEGNVW 
IHTLQVLDEA ASLRQLANNK REFMWAALLH DIGKRDTTKM RKGRWTAYDH DRVGAKLSKE 
ILEEATDNEK FISEVSSLVR YHMSYLYIDK NLPFVKPEDM VKNSDLHDIA LLTYCDRVGR 
GKKTLEDKKK ILDSINNFIV KVNEKTNGNY EKLYVLGK