| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1671 |
|---|
| Symbol | |
|---|
| ID | 4201371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | + |
|---|
| Start bp | 1890045 |
|---|
| End bp | 1890773 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638082545 |
|---|
| Product | putative 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| Protein accession | YP_696109 |
|---|
| Protein GI | 110798958 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.596452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGAT CTATATATTG GTATGGAAAA GGATATGCCT GGACATTAAT AAAATCCTTA
TCTGATATAA AAAAAATAAA TAAAATGGAA GAGGAAGGTA AGCTTGAGGA AAGAGATGAA
TACATATATC AATGCAGTAG AAGAATAGCT CATACTTTTC TTAAGGATGC TGGAATAGAA
GTTAATGTTG AAGGTTTAGA GAATATTCCT GATGGACCTG TTCTTTTTGT TTGTAACCAT
CAAAGTAATA TGGATATTCC TGTAATCATG TACTCTATTA ATAGACCAAA GGGATTTATA
GCAAAAAAAG AACTTGAAAA AATGCCTATA TTAAAAGATT GGATAATACT TTCAAAGGCT
ATATTTATTG ACAGGGAACA TCCTAAAAAA GCTATGGCAG GTATTATACA AGGAATTAAA
CAATTAAAAG AAGGATATTC AATGGTTGTT TTTCCTGAGG GAACAAGAAG TCAATGTAGT
AAAATGGGAG AATTTAAAGC TGGTAGTTTT AAATTAGCTA CTAAACCAAA GGTTCCTATA
GTTCCTCTTA CAATTGATGG AACATATAAA ATAATGGAAG GAAATCATTA TTTCATAAAA
CCTGGTAAAG TAAATCTTTA TATTCATCCA CCAGTTTACA CTGATAAACT TACAAAGGAA
GAAATTACAG AGCTTCCTGA AAAAGTTGAA AATATAGTTA GAAGTAAACT TCCTAATGAA
GGAAGATAA
|
|---|
| Protein sequence | MFRSIYWYGK GYAWTLIKSL SDIKKINKME EEGKLEERDE YIYQCSRRIA HTFLKDAGIE
VNVEGLENIP DGPVLFVCNH QSNMDIPVIM YSINRPKGFI AKKELEKMPI LKDWIILSKA
IFIDREHPKK AMAGIIQGIK QLKEGYSMVV FPEGTRSQCS KMGEFKAGSF KLATKPKVPI
VPLTIDGTYK IMEGNHYFIK PGKVNLYIHP PVYTDKLTKE EITELPEKVE NIVRSKLPNE
GR
|
|---|
| |