Gene CPF_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1662 
Symbol 
ID4203785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1878024 
End bp1879595 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content32% 
IMG OID638082537 
Productvoltage-gated chloride channel family protein 
Protein accessionYP_696101 
Protein GI110799945 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAATG AGAGTACGAA AAAAGTACTG TCACATAGAA AGGATTTAAG ATTTAAATTA 
GTTCTAGAAG GTGCTGCCAT AGGACTTTTA TGTTCTTTAG TTTTAGTACT AAATAGAATT
ATTGTTAATT ACTTATTTCC ACTTTTTAAA AAGCTTTATG CATGGGCAGC ATTAAGTATA
ACTAATATGA TTATAGTTTT AGTTATATTA GCTATTTTAG GAGCACTTGT TGGATTTATG
GTTAGAAGAG AGCCTATGAT TTCAGGAAGT GGTATTCCTC AAGTTGAAGG AGAATTAATT
GGTAAACTTA AAATGAATTG GCTAAAGATT TTAATTTATA AGTTCTTAGG AGGAGTAATT
TCCTTAGGAG CTGGATTGTC TTTAGGTAGA GAAGGCCCAT CAGTACAAAT GGGAGCCGCT
GTAGGAGAAG GATTTAGTAA TGGTTTAAAA AGAATAAATA TAGAGAAAAA ATATTTAATA
ACCTCAGGTG CTTCAGCTGG TTTAGCAGCA GCATTTAATG CACCTTTATC AGGGGTAATA
TTTGCCCTAG AAGAGGTACA TAAGAGTTTC TCACCTTTAG TTTTAGTTTC TGCAATGGCA
GCATCCTTAG TATCTGATTT TGTTTCAAAA CAATTTTTGG GAATGAATCC TAGTTTAGGA
ATAGAAAATG TTCCTGTATT ACCTTTAAAG TATTACTGGG TATTAATAAT ATTAGGAGTA
ATTTTAGGTA TAGGTGGTGC AATATTCTCA AAGGGAATTT TAAAAGTACA AAGTTTATAT
GGAAAGTTTA AAAATGTTCC TGTAGAAGTT AAGGTAATGA TTCCTTTCTT ATTAACAGGT
ATATTAGGTA TTTTCGCACC AATAATACTA GGTGGTGGAC ATGAACTTAT AATGGATTTA
GCAACTAAGA GCTTTCCAAT AAAGCTTCTT TTAGCTGTGC TTTTAGTTAA ATTTTTATTA
ACTATTATAA GTTTTGGTGC AGGTACACCA GGTGGTATAT TCTTCCCACT ATTACTTTTA
GGTGCAGTAG TAGGAAATAT AGTTGGAATA GTAAGTTGTA ATGCATTTGG AGTTCCAAAT
CAATATATAA TAGATTTTAT AATATTAGCT ATGGCAGGTA ACTTTGCTTC AATAGTAAAG
GCACCTATTA CAGGTATAAT ACTTATTACA GAGATGACTG GTTCTTTTGA ACATATGCTA
GCTTTATCTG TAGTTGTAAT AATTTCCTAT GTAACATCTG ACTTACTAAA AAGTGAACCA
ATATATGAAT CTTTATTAGA AAGATGGATA GAAAAGGTTG GTTCAGAAGT AGAAGAACCT
TCTAATAATA AAACTCTATT AGAGGTTGGA GTAGAACTTG GTAGTGAAGC AGAAGGAAAA
GAAATAAAAG ATGTTAATTG GCCAGAGACA GCTCTTTTAG TTGCAATAAA AAGAGGAAAT
AACGAAATAA TCCCTAAGGG ATCTATTGAA ATACAAAGTG GAGATTATTT AGTGGTTATG
GTAGATGAGA GCAGGGCAAG CTCTGTCTTA GAAGAAATTC AATTCTTAAC CTCTGCTAAA
GAAGAAATTT AA
 
Protein sequence
MSNESTKKVL SHRKDLRFKL VLEGAAIGLL CSLVLVLNRI IVNYLFPLFK KLYAWAALSI 
TNMIIVLVIL AILGALVGFM VRREPMISGS GIPQVEGELI GKLKMNWLKI LIYKFLGGVI
SLGAGLSLGR EGPSVQMGAA VGEGFSNGLK RINIEKKYLI TSGASAGLAA AFNAPLSGVI
FALEEVHKSF SPLVLVSAMA ASLVSDFVSK QFLGMNPSLG IENVPVLPLK YYWVLIILGV
ILGIGGAIFS KGILKVQSLY GKFKNVPVEV KVMIPFLLTG ILGIFAPIIL GGGHELIMDL
ATKSFPIKLL LAVLLVKFLL TIISFGAGTP GGIFFPLLLL GAVVGNIVGI VSCNAFGVPN
QYIIDFIILA MAGNFASIVK APITGIILIT EMTGSFEHML ALSVVVIISY VTSDLLKSEP
IYESLLERWI EKVGSEVEEP SNNKTLLEVG VELGSEAEGK EIKDVNWPET ALLVAIKRGN
NEIIPKGSIE IQSGDYLVVM VDESRASSVL EEIQFLTSAK EEI