| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1652 |
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| Symbol | deoD |
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| ID | 4201939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1867767 |
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| End bp | 1868474 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638082529 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_696093 |
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| Protein GI | 110801027 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000543003 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTATTC ATATAGGTGC AAAAGAAGGT CAAATAGCCG AAACAATTTT ATTACCAGGA
GATCCTTTAA GAGCTAAATT TATAGCTGAA ACTTTTTTAG AAAATCCAGT TTGTTACAAT
GAAGTTAGAG GAATGTTAGG ATATACAGGA ACATATAAAG GAAAAAAAAT ATCAGTTCAA
GGTACTGGTA TGGGGGTTCC TTCAATTTCT ATTTACGTTA ATGAACTTAT AAGAGATTAT
GGAGTTAAAA ATTTAATAAG AGTAGGTACT GCTGGCGGTA TGCAAGAAGA TATAAAAGTT
AGAGATTTAG TTTTAGCAAT GTCATCTCAT ACTGATTCTG CAATAAATAA AGTTAGATTT
AACGGTTTAG ATTTTGCTCC AACAGCATCA TTTAAACTTT TAAAGGCCGC TTACGATACT
GCCGTTGAAA AAGGATATTC TCCTAAGGTT GGTAGCGTAT TCACAGCTGA TAGCTTCTAT
AATGATAATC CTGAAGCATG GAAACAATGG GCTAAATTTG GTACTTTAGC TGTTGAAATG
GAAACTGCAG CTTTATATAC CTTAGCAGCT AAGTATGGTG TTAATGCGTT AACAATACTT
ACTATAAGTG ATCATTTAAT TACTGCTGAG GAAACTACTA GTGAGGAGCG TCAAACTACC
TTCACAAAGA TGATGGAAGT TGCTCTTGAT GCTGCTATAA CTTTATAA
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| Protein sequence | MSIHIGAKEG QIAETILLPG DPLRAKFIAE TFLENPVCYN EVRGMLGYTG TYKGKKISVQ
GTGMGVPSIS IYVNELIRDY GVKNLIRVGT AGGMQEDIKV RDLVLAMSSH TDSAINKVRF
NGLDFAPTAS FKLLKAAYDT AVEKGYSPKV GSVFTADSFY NDNPEAWKQW AKFGTLAVEM
ETAALYTLAA KYGVNALTIL TISDHLITAE ETTSEERQTT FTKMMEVALD AAITL
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