Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1643 |
Symbol | engB |
ID | 4201972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1856289 |
End bp | 1856882 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082520 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_696084 |
Protein GI | 110800363 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00260781 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAAGTTCGGA ATTTATAATA TCAGCGGTTA AGAGAGAACA GTATCCTGAT GATAACCTAC CAGAAATAGC TTTTGTTGGT AGATCAAATG TTGGTAAATC TTCTATAATT AATTCATTAA CTAATAGAAG AGGCTTAGCA AAGGTAAGTC AAACTCCAGG AAAAACTAGA TTAATAAATT TCTTCTTATT AAATAAAGAT TTTTATTTAG TAGATTTACC TGGTTATGGA TATGCAAAAG TATCTAAAAA AGAGAAGGCA TCTTGGGGTG CTACAATAGA AAGATATTTA TTAAATAGAG GACCTTTAAA GAAGGTTGTT TTATTAGTAG ATTGTAGACA TAAGCCTACT GCTGATGATG TTCAAATGTA TGAATGGATA AAGCATTATG GATATGAAGT TGTAGTTATT GCAACAAAGA GTGATAAGAT ATCTAATAAT CAAATAGGAA AAAGCGAAAA GCTTATAAAA GAAACTCTAG GATTACCTAA AGATCACAAA CTTAAGTTCT TCTCTTCATT AAATAAAAAA GGAAAAGATG AACTTGTAGA TTACCTTTTT GATGATTTAG TTGAAGAAGT TTAA
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Protein sequence | MKIKSSEFII SAVKREQYPD DNLPEIAFVG RSNVGKSSII NSLTNRRGLA KVSQTPGKTR LINFFLLNKD FYLVDLPGYG YAKVSKKEKA SWGATIERYL LNRGPLKKVV LLVDCRHKPT ADDVQMYEWI KHYGYEVVVI ATKSDKISNN QIGKSEKLIK ETLGLPKDHK LKFFSSLNKK GKDELVDYLF DDLVEEV
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