| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1629 |
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| Symbol | |
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| ID | 4203231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1846709 |
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| End bp | 1847872 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638082507 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_696072 |
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| Protein GI | 110801348 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.817421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAGAG CATACAAGAT AGAAATTAAT CCTACTGATG ATCAAAAATC TAAAATACAC
CAAACTATTG GTGTATCAAG ATTTATATAT AATTTCTACA TTGCTCATAA TAAAGAGATT
TACGAGAAAG AAGGAAAGTT TGTTAGTGGT ATGGACTTTT CAAAGTGGTT AAATAACGAA
TATATCCCAA ATAATCAAGA TAAAAAATGG ATTAAAGAAG TATCTTCTAA AGCTACTAAA
CAAGCTATTA TGAATGGAGA TAAAGCATTT AAAGATTTCT TTAAAAAAGC TAAGGGTTTT
CCAAGATTTA AGAAAAAGAA AAATCAAGAT GTAAAAGCTT ATTTTCCTAA GAATAATAAG
ACAGATTGGA CTTTAGAAAG ACATAGAGTC AAAATACCAA CTTTAGGATG GGTAAGATTA
AAAGAGTTTG GATATATTCC TAAAAATTCA GTAGTTAAAA GTGGTACAGT AAGTCAAAAA
GCTGATAGAT ATTATGTATC TATATTGGTT GAAGAAACAT ATATAAAAAT ATCTAATCCC
AATAATGAAG GTTTAGGAAT TGACCTAGGT ATTAAGGAAT TTGCAATATG TTCAAATGGT
AATAAATTTA AAAATATAAA TAAAACTTCA ACGGTTAAGA AAATCGAAAA GAAGTTAAAA
AGAGAGCAAA GAAAACTTTC AAGGAAATAT GAAAGTTTAA AAATAAGAAA TAAAAATATA
AAAGAAGGGA GAGCTACTCG TCAAAATATT CAAAAACAAG TAGTCAAAGT ACAAAGACTT
CATCAGAGAT TAGCTAATAT ACGAACTGAT TATATAAATA AAACAGTATT TTCAATAGTT
AAGCAAAAAC CAAGCTATAT AACAATTGAA GATTTAGCAG TATCCAATAT GATGAAGAAT
AAGCATTTAT CTAAAGCTAT TTCAAGTCAG AAGTTTTTTG AATTTAAAAC TAAACTAATG
TCTAAATGCA AACAAAATAA TATAGAACTT AGAATAGTTG ATAGATTTTA TCCATCATCA
AAGACTTGTA GTAATTGTGG AAAGATTAAG AAGGATTTAA AACTATCAGA TAGAATTTAT
AAATGCGATT GCGGATTTAC TATTGATAGA GATTTAAACG CAAGTATTAA TCTTAAAAAT
GCAAAAGAAT ATAAGATAGC TTAA
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| Protein sequence | MKRAYKIEIN PTDDQKSKIH QTIGVSRFIY NFYIAHNKEI YEKEGKFVSG MDFSKWLNNE
YIPNNQDKKW IKEVSSKATK QAIMNGDKAF KDFFKKAKGF PRFKKKKNQD VKAYFPKNNK
TDWTLERHRV KIPTLGWVRL KEFGYIPKNS VVKSGTVSQK ADRYYVSILV EETYIKISNP
NNEGLGIDLG IKEFAICSNG NKFKNINKTS TVKKIEKKLK REQRKLSRKY ESLKIRNKNI
KEGRATRQNI QKQVVKVQRL HQRLANIRTD YINKTVFSIV KQKPSYITIE DLAVSNMMKN
KHLSKAISSQ KFFEFKTKLM SKCKQNNIEL RIVDRFYPSS KTCSNCGKIK KDLKLSDRIY
KCDCGFTIDR DLNASINLKN AKEYKIA
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