Gene CPF_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1616 
Symbol 
ID4203071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1828707 
End bp1829459 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content25% 
IMG OID638082494 
Producthypothetical protein 
Protein accessionYP_696059 
Protein GI110799276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00659965 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC AAAAGAAAGA GTTTCTTATG ATTGGAATTG GATTAATAGG ATTATCTCTA 
GTTTTACATT ACGTGCATTA TCTTATATTT CAAGATTTAC ATCATACACT AATATTTCTT 
TTTGCAGATA TAGCCTTTAT ACCTATGGAA GTATTCTTTA CTACTTTAGT AATTGATAAA 
TTACTTGAAA AGAGGGAGAA AGAGCATTTA AGGGATAAGC TAAGTATGCT TATAGGAGTA 
TTTTTTAGTG AATTAGGAAC AGATATTTTA AATACATTTG TTTATGTAGA TGATAATACA 
GAAATAATTG CTAAAGAGGC CTTAGTAACT AAGGAATGGA ACAAAAATGA ATTTAAGAAT 
TTAGAAAAAT TAGTAGATGA ATATGAGTAT GATATAGATA TTAAAAAGGT GGACTTAATA 
GCTTTGGAAA AGAAATTAAA TGCTCAAAAG GATTTAGTTA TAAACTTAAT AACTAATCCC 
ATGTTAATAG AGCATGAAGA GTTCTCAGAC ATGCTTATGT CAATACTACA TCTAAGAGAA 
GAACTAAGTA GTAGATGTTC TCATGAATTA GAAGATTATG AAATTCAACA TTTAGCAAAA 
GATATAAATA TTGCTTATAA ATATTTAACC TTTGAATGGA TTCAGTATAT GAAACAATTA 
AAATCTAATT ATCCACAATT ATTCTTAAAA GCCTTAATTA CAAATCCTTT TGATAAAAGA 
TCATTAAAGG AAAAAGAATG TAGTTATTTA TAA
 
Protein sequence
MSKQKKEFLM IGIGLIGLSL VLHYVHYLIF QDLHHTLIFL FADIAFIPME VFFTTLVIDK 
LLEKREKEHL RDKLSMLIGV FFSELGTDIL NTFVYVDDNT EIIAKEALVT KEWNKNEFKN 
LEKLVDEYEY DIDIKKVDLI ALEKKLNAQK DLVINLITNP MLIEHEEFSD MLMSILHLRE 
ELSSRCSHEL EDYEIQHLAK DINIAYKYLT FEWIQYMKQL KSNYPQLFLK ALITNPFDKR 
SLKEKECSYL