Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1614 |
Symbol | |
ID | 4202588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1823380 |
End bp | 1827795 |
Gene Length | 4416 bp |
Protein Length | 1471 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638082492 |
Product | glycosy hydrolase family protein |
Protein accession | YP_696057 |
Protein GI | 110799664 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGT TAATAGCTTG TGGAATAGCA GCAAGTATAG TTTCAGTTAA TGGATTATCT GTTCTTGCTT CTGAGTTAAA TAAGTCAGAT AAAGTTAATT TAGCTTTAAA CAAAAAAACT GTTGCCTCTT CAAGAGAAGT TAATGACAAA TGGGGTGCAG AATTAATAAC TGATGGTATT AAGGATAAGC CAAGTGATCC AAATGCTAAG CCAGGAAATT CTAGGTGGGC TAGTTCAAGA AGTGTACCAC AATGGATATA CATTGATTTT GAAGAAGCAA CAACCTTTGA TCAAGTTGAT ATACTTTGGG ATGGTGCATA TTCAAGAAAT TATAAATTAG AGGTTTCTAA TGATGGGGAA ACTTGGGAAG AAGTTTACGC AACTAGTGAG GGGAAAGGAA ATCAAGAGTC TATAAATCTT GGAGAAGATA TAACTGCTAA TTATTTAAGA GTTAGTTGTG AAGATACAGC TCATGAATGG GGAAATGTAT CAATATATGA AGTTGAGGTT TATGATAACG AAAATGAGGA AAATGTAACT CCTCCAGAAA CAGAGATAGG AGTTAATATT GCTTTAAATA AAACTGCTAC GGCATCAGCA TCAGAAACTA ATACACTTAC TCCAGACAAA GTTGTAGATG GAGATACATC TTCAAGAAAT TCAAGATGGT CAAGTGGAGG ATTTTCTAAT GGTGCTAAAC AGTGGATAAC TATTGACCTA GAAAAGGAAA GCACTTTTGA CAAGGTTAGA TTATTCTGGG AAGCTGCCAA CGCTAAGGTC TATGAAATCC AAACTTCTAA TGATAATGAA AATTGGAAAA CAGTTCATAG AAACGAAGCT GGAAAAGGTG GCACTGAGGT TATAGAATTA AGTGAAAAAG AAAATGCAAG GTATGTAAGA GTTTATTGTG AAGAAAATAA TCCAGCAGTA TGGAATGCAG TATCTTTATA TGAAGTAGAG ATATATAATG GAGAGATTCC TTCATCTGGT GATTTAGATG AAGTTTTAAA CTCATTAGAA GTTCCTACTA TAAATAAGGG GGACTCTAAA CTTCAAATGC CAGAGGTTCC AAAAGGGTTT GAGATAAAAT TTATTGGGGC AGATTATAAT CAAATAATAA ATGATGATAT GACCATAAAT GAACCTTTAG TAGATACAAA GGTAGTTGTG GATTTTGAAA TAAAAAAAGG CAGTCTAAAA AGAGAAACTA CTGGTATTGA AATAACTGTA CCTGGTAAAT ATTCTGGTTC TTTAGGAAGT AATACTAAGC CAGAAGTAGT TCCAAGTTTA AGAGAATGGG TTGGAAAAGA TGGAAACTTT ACTATAAGAG ATTCTTCAAG AATAGTTATT GATCCTACCT ATGAAAATGA ACTAAGCAAA ACTGCAAGTG AATTTAAATC TGATTATGAG GAGATAGTTG GTAAACCAAT GGAAATAGTT TACTCAAGTT CACCTGTAGA AGGAGATTTT TATTTTACTT TAAATTGTGA AGATAAGAGT ATTGGAGAAG AAGGATATTA CATGTATGTA GATGAGTATG TAAAGGTTGA AGCTACTCAT AATACAGGAG CTTTCTACTC AACTAGATCA ATACTTCAAA TATTAAAGCA AAATGGAGAA ACTATTCAGA AAGGAATAGT TAGAGATTTC CCAAGATATG AAAATAGAGG ATTTATGCTT GATGCAGGAA GAAAATTCTT TACAATGGAT TATTTAGAGC AGTTTATGGA AGTTATGTCT TGGTACAAAT TAAATAACTT CCAAGTTCAT TTAAGTGATA ACTATATTTG GACTAATAAT GAGAATTGGG AAACTGCTTA TGCTGCTTTT AGATTAGAAT CTGACACATA TCCAGGTTTA ACAGCAACAG ATGGAAGTTA TACTAAAGAA GAGTTTAGAG AATTTATAGA AAAGTCTGGG GATCATGGAG TAGAAATTAT TCCAGAAATA GATGTTCCTG CTCACTCCTT AGCATTTACT CGCTATGATC AATCTTTAGC CTTAGGTACA GGAGGAGATG CAACTTATTT AGATGTAGGT AATCCAAAGG TTTATGATTT TGTAGATGGA TTATTTGATG AATATTTAGG AGGAGAAAAT CCAGTCTTTG GAGATCAAGA TTTCCATATT GGAACAGATG AGTATAAGGG AGCACCAGAG AAAAAAGAAG AATTTAGAGC ATTTACAGAT AGATATCTTA AAAAAGTAAG AGATGATTAT GGTAGAAATC CAAGACTATG GGGAAGTTTA GATGTTTTCC CAGGACAAAC TCCTGTAACT AGCGATGGAG TCCTTATGAA TATATGGTAT AGGGGATATG CTGATGCTAG AAATATGATA AATCAAGGAT ATGATATTTT AAATACACAG GATGCAGATC TTTATATAGT TCCAGAAGCA GGTTACTATA ATAACTATCT TAACACAAGA TTTTTATATA ATGAGTGGGA ACCAAGAAGA TTTGCTTCAG ATTACAAACT TCCAGCGGGA CATCCTCAAT TAAAGGGAGG AATGTTTGCT GTATGGAATG ATATGATAGA TGAAAAAGCA AATGGAATTT CTGAAAGAGA CATCTATGAT AGATCATTCC AAGCTGCTCA AGTTTTATCA GAAAAAATGT GGGCGGCACC TGATAGTGAA ACAAGTTTTG AAGAATTTAA AGAAAGAGTT GACAAAGTAA GTGATGTTCC AGATTCTAAC TTAACTTATG ATGTGGAATC TAAAACTGAA ACTGTAATTG ATTATGATTT TGAAGAAGAT TCTACAGAAA ATATTAAAGA TAATTCTGGA AATGAATATA ATGCTACAGG AGTAAATGTA GAATCTGTAG AAGGTAAAGA AGGAAAAGGA ATTAAATTAA GTGGAGGAGA AAGCTATATT GATACTCCAA TTGATAACAA AGGTTTAGAC TATACGGTTT CTATGTGGGT GAAGAAAGAT GCAAATGGAG ATTATAGTGA GCAAATATTA TCAGAATCTA ACACAGGGGT ATTAAAGGCT TGTCAAAAAG AAACTGGTAA TGTTGGTTTC TCAAGAGAAG GATATGACTA TTCATTTAAT TATAAATTAC CTGAGGATGA ATGGGTAGAG TTAACATTTA TTGGAGAATT AAATAAAACA AGTCTTTATG TAAATGGAGA ATTTATAGAA ACTATAAATA AGAGTAATGG TGGTAAGGTA GGAACATTTA TTTTACCTTT AGATAAAATA GGAAGTTCAA CTAATTCCTT TAAGGGTAGC ATAGATGAAA TTACTATTAA GGATGGGGCT CATAAAATTG TAGATCCTAC AGTTATACCT CAAGAGCAAA TGAGTGCAAC TGCTAGCAGT GAGCATCCTA ATATAGGATC AGAGGGAATA GCTGATTTTG CTATAGATGG AGATGAAAGT ACTATATGGC ATACTAAGTG GAGTCCTGTA GAAGCATTAC CTCAACACAT TACTTTAGAC TTAGGTGGAA GTTATAATAT AAATAAATTT ACTCATATGC CAAGACAGGA TGCCTTAAAT GGTAGCATAA GTAAATATGA ATTCCAAGTT AGTACTGATG GAGAAAACTT TACAAAGGTT TTAGAGGGAG ATTGGACTGC TGACCATAGT ACTAAGGTAT TAAAATTTGA TCCAGTAGAA GCTACTCATG TAAGATTAGT GGCTAAAGCT GGTCATGGTG GATTTGCCTC AGCTGCTGAA TTAAATGTTC ATCAAGTTTT AGAAGTTCCA CAAGAGAATG TGGGACAAAG TTTCTTAACT TTACCAGAAA GCCTTAAAGT AAATGAAAAT TTTGATGTTT TCTTAGGTGC TAACGAAATA AAAGAAGATT TATCAGCTTA TGCAGCAGAA TTTACTTTAA AATATAATCA AGAAGTATTT GACTTAGTTG AAGTTGCAAG TGGAATAGAT GGAGTTTTGG TAAATTATAA AGAAGTAGAA CCAGGCGTAG TAAAAATATT AGTTGCTAGT TTAGAAAAAA CTATAGAAAA TGATACAAAC TTAGTAAAGG TAACTCTTAC TCCTAAGAGT GAATCAGAAA GAGAAATTTT TGAAGTAATT TCAGCAAACT TAGGTGATGG AGAAAATGGA AAAGTTTGTG AATTAGGATT AACAAGTGGA GAGGTAGCAG TAGGCAAAGG TAGTGTAGAT ATAATTGTTA ACCCAGTAGA AAACTTTGTG GCTTCAGAGA TTAGTAGAAA ATATGTAAAT GTAACTTGGG AAGCTCCAAA GACAACTGAA GGTTTAGAAG GATATATTTT ATATAAAGAT GGTAAAAAGG TTGGAGAAGT TGGTGCTGAT GAGACAACTT ATAAATTTAA AGGCTTAAAT AGACACACAA TTTACAACTT TAAAATAGCT GCTAAGTATT CAAATGGAGA AATTTCTAGT AAGAAGTCAA TAACTTTAAG AACAAGCAGA AATTAG
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Protein sequence | MKRLIACGIA ASIVSVNGLS VLASELNKSD KVNLALNKKT VASSREVNDK WGAELITDGI KDKPSDPNAK PGNSRWASSR SVPQWIYIDF EEATTFDQVD ILWDGAYSRN YKLEVSNDGE TWEEVYATSE GKGNQESINL GEDITANYLR VSCEDTAHEW GNVSIYEVEV YDNENEENVT PPETEIGVNI ALNKTATASA SETNTLTPDK VVDGDTSSRN SRWSSGGFSN GAKQWITIDL EKESTFDKVR LFWEAANAKV YEIQTSNDNE NWKTVHRNEA GKGGTEVIEL SEKENARYVR VYCEENNPAV WNAVSLYEVE IYNGEIPSSG DLDEVLNSLE VPTINKGDSK LQMPEVPKGF EIKFIGADYN QIINDDMTIN EPLVDTKVVV DFEIKKGSLK RETTGIEITV PGKYSGSLGS NTKPEVVPSL REWVGKDGNF TIRDSSRIVI DPTYENELSK TASEFKSDYE EIVGKPMEIV YSSSPVEGDF YFTLNCEDKS IGEEGYYMYV DEYVKVEATH NTGAFYSTRS ILQILKQNGE TIQKGIVRDF PRYENRGFML DAGRKFFTMD YLEQFMEVMS WYKLNNFQVH LSDNYIWTNN ENWETAYAAF RLESDTYPGL TATDGSYTKE EFREFIEKSG DHGVEIIPEI DVPAHSLAFT RYDQSLALGT GGDATYLDVG NPKVYDFVDG LFDEYLGGEN PVFGDQDFHI GTDEYKGAPE KKEEFRAFTD RYLKKVRDDY GRNPRLWGSL DVFPGQTPVT SDGVLMNIWY RGYADARNMI NQGYDILNTQ DADLYIVPEA GYYNNYLNTR FLYNEWEPRR FASDYKLPAG HPQLKGGMFA VWNDMIDEKA NGISERDIYD RSFQAAQVLS EKMWAAPDSE TSFEEFKERV DKVSDVPDSN LTYDVESKTE TVIDYDFEED STENIKDNSG NEYNATGVNV ESVEGKEGKG IKLSGGESYI DTPIDNKGLD YTVSMWVKKD ANGDYSEQIL SESNTGVLKA CQKETGNVGF SREGYDYSFN YKLPEDEWVE LTFIGELNKT SLYVNGEFIE TINKSNGGKV GTFILPLDKI GSSTNSFKGS IDEITIKDGA HKIVDPTVIP QEQMSATASS EHPNIGSEGI ADFAIDGDES TIWHTKWSPV EALPQHITLD LGGSYNINKF THMPRQDALN GSISKYEFQV STDGENFTKV LEGDWTADHS TKVLKFDPVE ATHVRLVAKA GHGGFASAAE LNVHQVLEVP QENVGQSFLT LPESLKVNEN FDVFLGANEI KEDLSAYAAE FTLKYNQEVF DLVEVASGID GVLVNYKEVE PGVVKILVAS LEKTIENDTN LVKVTLTPKS ESEREIFEVI SANLGDGENG KVCELGLTSG EVAVGKGSVD IIVNPVENFV ASEISRKYVN VTWEAPKTTE GLEGYILYKD GKKVGEVGAD ETTYKFKGLN RHTIYNFKIA AKYSNGEISS KKSITLRTSR N
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