Gene CPF_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1605 
Symbol 
ID4202336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1815423 
End bp1817012 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content23% 
IMG OID638082483 
Producthypothetical protein 
Protein accessionYP_696048 
Protein GI110799492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTT TTTTTACAGA TATTTCAATT GACAAACTTA TCGTAAACCC TGAAAATTAT 
AGATTTGATT CTGTTGACAA TGAAACTTCA GCAATAAAAA TAATGTTACA AAATCATAAT
AAAGCAATCA AAGAATTATT AAAGGATATT TTAGAAAATG GACTTAATCC ACTAGAAAGA
TTATTAGTAT TTAAAAAGAA TGAATTTTAT ATTGTATTAG AAGGAAATCG AAGGGTAACT
GCTCTTAAAA TAATACATAA TGTGAATCTT CTAAAAGATA TTGAACAAAA ATATTTTAAT
GAATATTCTA AAATACTTAA TAACGCTAAT TCTAAAATCA ATATTGATAA GATTTCTTGC
GCTATAACAG ATAATATTTC CGATTCCAAT AAATGGATTG CACTTAAACA TACTGGATCT
AATGGTGGAA AAGGTACTAT TCCATGGGAT ACAACTCAAA AAAGACGATT TTTAAATAAA
ACAAATCCCA ATAATTCATC TAATATAATA ACTTCATTGT TCTCTTACAT AAAATCAAGT
AACATTTATG ATGATACAAT AACCCAAAAT CTAACTAATA TACCTATAAC TACACTTGAA
AGAATATTAA GTGATCCATA TGTAAGAGAA AATATTGGTA TAGATATTAA AAAAAATACT
ATATATAAAT TATATCCAGA TAGCGAAATA AAGAAACCAT TGTCAAAGAT TCTACACGAT
TTGATAAATA AAACAATTGT AGTAACAGAT GTTTATACTA AAAATGATAG ATTGGATTAT
ATAGAAACTT TTAATAGCAA CTCACTACCT AATTATGCAA ATAAATTAAA TAAACCAGTT
GAAATATTAT CTAATTTAAA TCTTATCAAT TTACCTTTAC AAACAACTAT TGATAATAAC
TCTAATAATG ATAATAGTGC TAATACCGAT AATATTAACT CTAACAATAT CAATAATAGT
GCTACTACTA ATAATACTAG TAATAATACT AGTAATAATA CTAGTAATAC TAATAATATC
GCTAATATTG ATAATAATAA CTCTAGCAAT ATCAATAATA GCACTAATAA TAATAATAAT
AATAATAACA ATACCGGTAA TAGTAGCTCT ATCAAATCTA CTTCTCCAAA AAGAGATAAT
AAAGATATTA ATAAAAGAAA AGCTCTAATT CCAAGTACAT TTCATGTTAA AATAACTGTA
CCAAGAATAC AACAAATTTA TAAAGAATTA AAAAAATTAG ATGTATCTGA TTTTCCTAAT
TCAACCTCAG TTCTTTTTAG AGTATTTTTA GAATTAGTTG TAGATGAATA TATAGAAAAG
CTTAATTTAA CTGGACTTTC AAATAACGAT AAACTCAATA AGAAAGTACA AGCTTGCATT
GATGATTTAA AAAGTAAAAA TTTAATTGAT AAAAACAAAG TAAAACCTAT TAATGTAGCA
ATATCTAATC ATGATAGTCT ATTTTCAATA AATACATTTA ATAGTTATGT TCATAATAAA
CATATGCTAC CTGATGCAAC TAATTTAAAA AACACTTGGA ATCAATTTGA ATATTTTATT
TTAGTTTTAT TAAATTCAAT CACAAAATAA
 
Protein sequence
MSTFFTDISI DKLIVNPENY RFDSVDNETS AIKIMLQNHN KAIKELLKDI LENGLNPLER 
LLVFKKNEFY IVLEGNRRVT ALKIIHNVNL LKDIEQKYFN EYSKILNNAN SKINIDKISC
AITDNISDSN KWIALKHTGS NGGKGTIPWD TTQKRRFLNK TNPNNSSNII TSLFSYIKSS
NIYDDTITQN LTNIPITTLE RILSDPYVRE NIGIDIKKNT IYKLYPDSEI KKPLSKILHD
LINKTIVVTD VYTKNDRLDY IETFNSNSLP NYANKLNKPV EILSNLNLIN LPLQTTIDNN
SNNDNSANTD NINSNNINNS ATTNNTSNNT SNNTSNTNNI ANIDNNNSSN INNSTNNNNN
NNNNTGNSSS IKSTSPKRDN KDINKRKALI PSTFHVKITV PRIQQIYKEL KKLDVSDFPN
STSVLFRVFL ELVVDEYIEK LNLTGLSNND KLNKKVQACI DDLKSKNLID KNKVKPINVA
ISNHDSLFSI NTFNSYVHNK HMLPDATNLK NTWNQFEYFI LVLLNSITK