Gene CPF_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1604 
Symbol 
ID4201852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1815028 
End bp1815372 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content28% 
IMG OID638082482 
ProductDNA-binding protein 
Protein accessionYP_696047 
Protein GI110800265 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00115974 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTGGAA ATAGATTAAA GACTTTAAGA AAAGAGAAGG ATTTAACCCA AGCTCAACTA 
GCTAATATAT TAAAAACATC AGCTAGTGCT ATTGGAATGT ATGAGCAAAA TAGAAGAACT
CCTGATACAG AAACTCTACA AACTTTATCA AACTATTTTA ATGTATCTGT AGATTACTTA
ATTGGAAAGA CAGAAATACG AGAATCTGCT GAACAATTAT TAGAAGATAA ATCAGTTACC
ATTGCTCTAC ACAATAAAAA TGGTATTGAT GATGAGCTTC CTGATGAAGC TAAAAAGGAA
ATTGAAAATT TTATTGAATA TGTAAAACAT AAATATAAAA AATAG
 
Protein sequence
MFGNRLKTLR KEKDLTQAQL ANILKTSASA IGMYEQNRRT PDTETLQTLS NYFNVSVDYL 
IGKTEIRESA EQLLEDKSVT IALHNKNGID DELPDEAKKE IENFIEYVKH KYKK