Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1604 |
Symbol | |
ID | 4201852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 1815028 |
End bp | 1815372 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082482 |
Product | DNA-binding protein |
Protein accession | YP_696047 |
Protein GI | 110800265 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00115974 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTGGAA ATAGATTAAA GACTTTAAGA AAAGAGAAGG ATTTAACCCA AGCTCAACTA GCTAATATAT TAAAAACATC AGCTAGTGCT ATTGGAATGT ATGAGCAAAA TAGAAGAACT CCTGATACAG AAACTCTACA AACTTTATCA AACTATTTTA ATGTATCTGT AGATTACTTA ATTGGAAAGA CAGAAATACG AGAATCTGCT GAACAATTAT TAGAAGATAA ATCAGTTACC ATTGCTCTAC ACAATAAAAA TGGTATTGAT GATGAGCTTC CTGATGAAGC TAAAAAGGAA ATTGAAAATT TTATTGAATA TGTAAAACAT AAATATAAAA AATAG
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Protein sequence | MFGNRLKTLR KEKDLTQAQL ANILKTSASA IGMYEQNRRT PDTETLQTLS NYFNVSVDYL IGKTEIRESA EQLLEDKSVT IALHNKNGID DELPDEAKKE IENFIEYVKH KYKK
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