Gene CPF_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1593 
Symbol 
ID4203756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1809920 
End bp1810381 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content27% 
IMG OID638082471 
Productputative DNA-binding protein 
Protein accessionYP_696036 
Protein GI110799974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000216189 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGTA ATATGATTAA GTTTAAGGAT GATGTAGAAG GATTATTAAA GAGTTATAAA 
GAAACAGTAA GAGAAATAAG AGCTTTGGAA TTAGAAATTG CAACTGTAGA AAATGAATAT
CAAGGATGTG GAGCATTACA ATATTCAGAA AGAACTGGAA CAACTTATAA AATAACAGAT
CCAGTAGTAA ATGAAGTTTT ATCAAAGGAA AAGAGAATAC AGTTTCTTAA ATATTTGAAA
AGAAATAAGG AGTTGAGGAT AAAGAAAATA GAAAACCTAA TATCATGTTT AGATGAAGTT
GAGTATGAGA TAATCACATC ATATTACTTT AGGGGAATGA ATATGGAGAG TATTGCTGAA
AGATTAGGGA TGAATCCTAA ATATCTTATA TGCAAAAAAT CAAAAATAAT TAAGAAAATA
GAGTTAGATA TGATGAATTT AAAAAGTCTA ACTAATTTCT GA
 
Protein sequence
MIGNMIKFKD DVEGLLKSYK ETVREIRALE LEIATVENEY QGCGALQYSE RTGTTYKITD 
PVVNEVLSKE KRIQFLKYLK RNKELRIKKI ENLISCLDEV EYEIITSYYF RGMNMESIAE
RLGMNPKYLI CKKSKIIKKI ELDMMNLKSL TNF