Gene CPF_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1590 
Symbol 
ID4203192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp1808517 
End bp1809065 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content27% 
IMG OID638082468 
Productphage integrase family site specific recombinase 
Protein accessionYP_696033 
Protein GI110799530 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000133866 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATG TTGAACCAAT AAGAGATTCA AATAAGGTAC ATGAGATTGC TAATTACTTA 
AGAAAGTATA GTGAAAGAAA TTATATTATG TTCATACTAG GTATTAATTC AGGATTAAGG 
ATAAGTGATA TTTTAAGTCT TAGAATTAGA GATGTTAAAG GAAAAGATTA TATTTCCATT 
AGAGAAAAGA AAACTGGAAA GCAAAAGATA TTTCCAATGA CACCAATATT AAAAAGAGAA 
ATAAAGAAAT ATTGTGATGA AAAAGATTTA GACCAATTTC TTATAAAATC AAAGAAAGGT 
TATAACAGAC CTATTGGAAG AAAACAAGCT TACACTATAT TAAGAGATGC AGGAGAAACT 
TTAGGACTTT ATAACTTAGG AACTCACACT TTAAGAAAGA CTTTTGGATA TCATTTTTAT 
ATGCAATATA AGGACGTTGT TACACTCCAA AAGATATTCA ATCATTCTGA CCCTTCAATA 
ACTTTACATT ATATAGGGGT TGAACAGAGC CATATAAATA GAATGATTAA AGGTTTTAAA 
ATCTATTAA
 
Protein sequence
MNYVEPIRDS NKVHEIANYL RKYSERNYIM FILGINSGLR ISDILSLRIR DVKGKDYISI 
REKKTGKQKI FPMTPILKRE IKKYCDEKDL DQFLIKSKKG YNRPIGRKQA YTILRDAGET 
LGLYNLGTHT LRKTFGYHFY MQYKDVVTLQ KIFNHSDPSI TLHYIGVEQS HINRMIKGFK 
IY