Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1586 |
Symbol | |
ID | 4202382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 1803526 |
End bp | 1804773 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082464 |
Product | HK97 family phage portal protein |
Protein accession | YP_696029 |
Protein GI | 110799190 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00170734 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTT TTAAAAAGTT ATTTAATAAA AGAAGTAATT ATGATGAAGA GATTGGTATT AATATATCTG ATTCTAACTT TTGGGAGAAG TTTGGTATTA AATTAAAATT TTTAATATCA GGTAAGAGAG TATTAAAAGA AAATACAGTT TATATATGTA CTAAGGTAAG AGCTGAAAGC ATAGGTAAAT TATCTTTAAA GATTTACAAG GATAGAGAAG AGTATAAAGA ACATGAACTT TATTATCTTT TAAGATATAA GCCTAATCCA TTAATGAACT CAATTAATTT TTGGAAGTGC TTAGAAGCAC AAAGAACTTT AAAAGGTAAT GCGTATACAT ATATAGAAAG AGATAGAAGA GGAAAGATAA TTGGTTTATA TCCTATTGAT TCAGATAATG TAACTAAAGT TATGGATGAT AATAACTTTT TAAGTAGTTT AACTAAAGTT TGGTATATAG TAACTGACAA TAAAGGGATT AAACATAAGT TACTTCCTGA TGAAATACTA CATTTTATTG GAGATATTAC TTTAGATGGA TTAATAGGAA TAGCTCCACT TGATTATTTG AAATGTACTA TTGAGAATGG AAGAGCTACT CAGGAGTTTA TAAATAAATT CTTTAAAAGT GGATTAACTA CAAAAGGAAT AATTCAATAT GTAGGAGAGC TAGACGAAAA GGCAAAGAAA ACTTTTATAA AAGAATTTGA ATCTATGAGT AATGGTCTAG CAAATGCTCA TTCGGTTTCA TTACTTCCTT TAGGGTATCA ATTTCAACCT TTGTCATTAA GCATGGCAGA TGCACAATTT TTAGAAAATG CAAAATTAAC TAAAAGAGAA TTAGCAGCAG CATTTGGAAT GAAGTCATAT CATCTTAATG ATTTAGAGAG AGCAACATTT AATAATCTTA CAGAACAACA GAAAGATTTT TATATAACAA CACTTCAACC ATCTCTTACT AATTATGAAC AAGAGATGCA AGATAAATTA TTAAGTCAAT ATGAAACTTT AAATAATGTG AAAATTGAGT TTAATGTAGA TAGTATTTTA AGAAGTGATA TAAAAACAAG ATATGAAGCT TATAGAATTG GTATTCAAAG TGGATTTATA GCTTCCAATG AGGTGAGAAA AAAAGAAAAT TTACCACCAA AAGATGGAGG AAATGAATTA CTTATAAATG GTAATATGAT GCCTATAGCT ATGGCTGGAA AACAATATTT GAAAGGTGGT GATAATAGTG GAGCATAA
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Protein sequence | MKFFKKLFNK RSNYDEEIGI NISDSNFWEK FGIKLKFLIS GKRVLKENTV YICTKVRAES IGKLSLKIYK DREEYKEHEL YYLLRYKPNP LMNSINFWKC LEAQRTLKGN AYTYIERDRR GKIIGLYPID SDNVTKVMDD NNFLSSLTKV WYIVTDNKGI KHKLLPDEIL HFIGDITLDG LIGIAPLDYL KCTIENGRAT QEFINKFFKS GLTTKGIIQY VGELDEKAKK TFIKEFESMS NGLANAHSVS LLPLGYQFQP LSLSMADAQF LENAKLTKRE LAAAFGMKSY HLNDLERATF NNLTEQQKDF YITTLQPSLT NYEQEMQDKL LSQYETLNNV KIEFNVDSIL RSDIKTRYEA YRIGIQSGFI ASNEVRKKEN LPPKDGGNEL LINGNMMPIA MAGKQYLKGG DNSGA
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