Gene CPF_1573 details

Gene Information

• Locus tag: CPF_1573
• ID: 4201034
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 1789859
• End bp: 1791739
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 638082451
• Product: metallo-beta-lactamase family protein
• Protein accession: YP_696016
• Protein GI: 110801174
• COG category: [R] General function prediction only
• COG ID: [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily)

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATATT TAGAACCACC TAGAAAAATT TATATTAATC GAGATGATCC AATAGAAATT 
AAAGCGGTTG AGCATGATAT TAAATCAAGG TTTATAGATT TTAAGTTTCT AGGTGAAATT 
AATATTATAG ATTTAACATA TAGTACAGTT AGAATTTCTG GTATAAACCC CAAACATTTT 
TCTATTTTTG ATGAGTTAAC TATAGTTGAT GGTAAAAAAG GAATTGCAAG ATTAGAATTA 
ACAGATGATT TTTTAATTCC AGGAACAGCA GATTATCAAT TAACAATTAG TGATTCTACT 
GGTAGCCATC TTACACCGCT TTGCTTAGTT AGATTAATTA TTTCCGAAAG TTTAGTAGAT 
ACTGAAGCTA TACAAAGTTC TAATAAATTT TCTGCGTTAG ATAAGGCTCT TGCAAAAGTA 
GATAATTTTA ATGAGGTAGA TGTAAGAAGT AAAGAAAATG CTTCTAACAT AACTGAAATG 
ACTAAAAAAT TGGATTATAC AGCAGAAAGA ATGCAGGATA ATACAGAAAC TATTATTTAT 
AACCTTAAAA ACAAAGAAGG CTCTTATGGA GATTGTATAG TAATAAAGAG CGACGATGGA 
ACATTTTCGA TGATAGATTG TTTCATGGAA GAAAATTTTC AAATAATGAT TCAACAACTA 
GATAAAATTG GAGTAAATAA ATTAAAATAT TTTTTTGCTA CTCATGATCA TTCTGATCAT 
ATAGGGAATG CACCAGCCAT TATAGAAAAA TATAGACCAC AATACATTGT ATATAAAGAT 
GGAATAGATT ATTCTAGGTT ACCATCACAA GAAACTGAAT GGGACACTAA AGGGTACCAT 
GATAGAATGT TAGCAGCAGC AGATAAATTC AATGTACAAA AAATAGTTGC TAATGACCAA 
CAGTTCAGAA TTGGGAAAAA TGATTATATA GAAGCTTTCG CATCTAAATT CTATGATTAT 
AGCAATGAAA ATAATATGAG TGTTAATTAT CTTCTAGTAT CTCATGGAAC TAAATCATTG 
TTTCCTGGTG ATAGTACAGT AGCTACTGAA ACACATTTAC AAAACAGAAT AGGGAAAATT 
GATTTATACA AATTAAGTCA TCACGGAGCA GACGGTGGTA ACTCAGACAG GCGATTTGAA 
GAATTACAAG CTAGGTATTG TTTAATAGAT AGATTGGATG TTTATAAGAA AGATATAATA 
AAAAACTTTG CTTTAAAATG TCTAAAATAT GGCGGTAAAG TTTACTCCAA CGATAATAAT 
GATATGACAG TATTTAAGAT AAGTCGAGGT GCTATTTATC CATGTTGTCA TGAGTATAAA 
TTACCACTTC AATTCCTGGA TTACTATAGC GGCAAATATA AAATGACTAA TGAAGCTGGT 
GGAATTGCAA CTAAAGGAAT TTACCCTTAT AAGAGTGATT TCTATTTCGT AAAAGATGAT 
GGATTTATTG CTAAAAATGA GTGGATAAAA CATGATGGGA TTGATTATCA TGCAAGTTCT 
TCAGGTGCTT TAGATAGAAA TTGCTTTATT CAAGGTACTT TTAATGAAAA ACCTTGTTAT 
TATTGGATAG ATGAAAATTG CAAAATGGTT ATAGAGCCTA AACTTATTTA TTATAACAAT 
AATACTTATT TAATTAAGTC TAATACATTA ATGGCAGAAG AAGAGTTTTA TGAATACCAA 
GCTAACTATT ATTATGCTGG TAAAGGTGGA GCATTAAAGA AGAATGAATG GCTTTATAAA 
GATTCTAACT ACTATTGGCT AAAATTTAAT GGGGTAATGG CTTCCGAGGA AACCTTATTT 
ATCGAAGGTA AATGGTACGA CTTTAATGGA AGTGGAGTAT GTACTAATCC AAGTGCTGGA 
AGAGATACAA AAGCTAAATA G 

 

Protein sequence

MQYLEPPRKI YINRDDPIEI KAVEHDIKSR FIDFKFLGEI NIIDLTYSTV RISGINPKHF 
SIFDELTIVD GKKGIARLEL TDDFLIPGTA DYQLTISDST GSHLTPLCLV RLIISESLVD 
TEAIQSSNKF SALDKALAKV DNFNEVDVRS KENASNITEM TKKLDYTAER MQDNTETIIY 
NLKNKEGSYG DCIVIKSDDG TFSMIDCFME ENFQIMIQQL DKIGVNKLKY FFATHDHSDH 
IGNAPAIIEK YRPQYIVYKD GIDYSRLPSQ ETEWDTKGYH DRMLAAADKF NVQKIVANDQ 
QFRIGKNDYI EAFASKFYDY SNENNMSVNY LLVSHGTKSL FPGDSTVATE THLQNRIGKI 
DLYKLSHHGA DGGNSDRRFE ELQARYCLID RLDVYKKDII KNFALKCLKY GGKVYSNDNN 
DMTVFKISRG AIYPCCHEYK LPLQFLDYYS GKYKMTNEAG GIATKGIYPY KSDFYFVKDD 
GFIAKNEWIK HDGIDYHASS SGALDRNCFI QGTFNEKPCY YWIDENCKMV IEPKLIYYNN 
NTYLIKSNTL MAEEEFYEYQ ANYYYAGKGG ALKKNEWLYK DSNYYWLKFN GVMASEETLF 
IEGKWYDFNG SGVCTNPSAG RDTKAK