Gene CPF_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1569 
Symbol 
ID4201228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1786323 
End bp1786805 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content27% 
IMG OID638082447 
Producthypothetical protein 
Protein accessionYP_696012 
Protein GI110799223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00257234 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA TATTAGACCC AATTTTAAGT GCTTTAGCTG CTGCTATTAC ACTTTTTTTA 
GCTACAATAA TAAAAACTCT AGGTGACCAA TTAATACAAC TAATTAAAGT CAAGATAGAA
GCTACAGACC AAAAGCTTAA AGCTTCTAAA TTTAATGAAG CATATGAAAC TGGTAAAAAA
ATATTCTTTG CTATAGAAGA AAAATATAGA ATTACAGAGA ATATAGAAAA TCTTGCTAAA
TCAAAAGCTG ATTTATTTGA TAAAATGCTT TTAGAAAACT GTCCATACTT AACCAAAGAT
GAATTAATAC AAATTAGACA AGCTATAGCA GGAGAATATA ACAAAGGAAA AGCTATGCTA
TATGAAGATA GTTTAAAACA ACAAGCTACA CAATTAGTAG AAGAAAATGA GAAGTTAAAA
TTATTAAATG CAGAAACAGA AAATAAATTA GCAGCAGTAA AAAGCTTAAA TGAGAGCCTA
TAA
 
Protein sequence
MEKILDPILS ALAAAITLFL ATIIKTLGDQ LIQLIKVKIE ATDQKLKASK FNEAYETGKK 
IFFAIEEKYR ITENIENLAK SKADLFDKML LENCPYLTKD ELIQIRQAIA GEYNKGKAML
YEDSLKQQAT QLVEENEKLK LLNAETENKL AAVKSLNESL