| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1562 |
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| Symbol | |
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| ID | 4203069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 1781006 |
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| End bp | 1782667 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082440 |
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| Product | NlpC/P60 family protein |
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| Protein accession | YP_696005 |
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| Protein GI | 110799274 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000246871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGGA ATAAGATAGC AGCTTTGATT TTTGCTGTAT CAACGGTATG TGTTGTTTCA
GCACACAGTG AAAATGCTTA TGCAACAGAA CATAAAAATT CTAATCAATT AGAAGAGAAT
AATCAAACTA GATCGGTAAA AAAAGGACAA GTTATAAATG TAAGTACAAA TTTAAGAATT
AGAAAGAGTC CAAATACAAG CAGTGATGTT ATTGGATATT TAACTAATGG TGAAATTTTT
AATATAGATG GAAAAGAAGG TTCATGGTAT AAAATAAATG CTAATGGTAA AGTTGGATAT
ATTCATGGAG ATTATGTTAA AGAAGTAAGT GGAAATTCTA ATAGTAGCAG CAATAATAGT
GTAAGTAATT CAAATTTAGA TACTTCATTA GCTGGGAAAA AGGGTACTGT TGTAAACGTA
AGTACTTCTT TAAGAGTTAG ACAATCACCA AGCACAAGTA GCTCAGTTGT AGGTAGCCTA
AGAGGTGGTC AGACATTTGA GATAAAGGGT AAAAGTGGAA GTTGGTATTA TATAAATGCA
AATGGACTTA CAGGCTATAT TCATGGAGAT TATGTACAAG TAGGTGAAAA TAGTTCAAAT
AATGGTGGGC AATCATCAGG AAATAATGGA CAATCATCAG AAAATAATTC AGGAATGGAT
ACTTCATTAG CAGGAAAAAC TGGTAAGGTT GTAAATGTAA GTACTTCTTT AAGAATTAGA
CAATCACCAA GTACAAGTAG CTCAGTTGTT GGATCATTAA GTGCAGGCCA AACTTTTAAG
ATAAATGGTA AAAATGGAGC TTGGTATAAT ATTGATGCAC AAGGAACAAA AGGACATGTT
CATGGAGATT ATGTACAAGT ATTAAGTGGA AACGAAAGTT CTAATAGTGG AAGTAATAAT
AATCAAAGTG GAAGCCAAAA TAACAATTTA GATGAATCTT ATAATGGAAA AGCTGGAAAG
GTTGTAAATG TAACAACTAA TTTAAGACTT AGAAGTCAAC CTAGTACTAG TAGTTCTGTT
TTAGCATATT TATTACCTAA TGAAAGATTT ACTTTACAGG GAAAGACTTC TTCAGGATGG
TTTAAAGTAA ATTATAATGG AAAAATTGGT TATTTACATG AAGATTATGT TAAAATAGTA
TCTTCAGATG AAGGGGCAAA TGGAAATACA GGCGGAAACC AAAATGGAAG CACAAGTGGT
GGACAAGTTA ACCAAAGTAA ATATGAACAA GTTTTAAGTA TTATGAAATC TCAAATTGGT
TCTCCATATA TTTATGGAGG TGCTGGAGAA ACACTAACTT CAAGCTTATT AAGTAGCTTA
AGAAGAACTT TCCCAGATCA TGCTGCAAGA GGATTTTATG ATATACCATC AAACTATTTA
AATGGAAATT ACAGAGCCTT TGATTGTTCT GGATTAATGC AATGGAGTTT TAGACAAGCT
GGAATTAGTT TAGGAAGAAC AACTTGGGAT CAAATAAACA ATGGATATGA AGTTTCTCCA
AGTAATGCTA AGCCAGGAGA CTTATTATTC TTTAGTAATT TAGGCCATGT AGGTATGTAT
ATAGGAAATG GTCAATGGAT AGAGGCGCCT AACAAAGGTA AATTTGTTTC TATTACATCT
GTTCCATGGA GTAAAATAGG AAGAGCAAGA AGGGTTCTTT AA
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| Protein sequence | MNRNKIAALI FAVSTVCVVS AHSENAYATE HKNSNQLEEN NQTRSVKKGQ VINVSTNLRI
RKSPNTSSDV IGYLTNGEIF NIDGKEGSWY KINANGKVGY IHGDYVKEVS GNSNSSSNNS
VSNSNLDTSL AGKKGTVVNV STSLRVRQSP STSSSVVGSL RGGQTFEIKG KSGSWYYINA
NGLTGYIHGD YVQVGENSSN NGGQSSGNNG QSSENNSGMD TSLAGKTGKV VNVSTSLRIR
QSPSTSSSVV GSLSAGQTFK INGKNGAWYN IDAQGTKGHV HGDYVQVLSG NESSNSGSNN
NQSGSQNNNL DESYNGKAGK VVNVTTNLRL RSQPSTSSSV LAYLLPNERF TLQGKTSSGW
FKVNYNGKIG YLHEDYVKIV SSDEGANGNT GGNQNGSTSG GQVNQSKYEQ VLSIMKSQIG
SPYIYGGAGE TLTSSLLSSL RRTFPDHAAR GFYDIPSNYL NGNYRAFDCS GLMQWSFRQA
GISLGRTTWD QINNGYEVSP SNAKPGDLLF FSNLGHVGMY IGNGQWIEAP NKGKFVSITS
VPWSKIGRAR RVL
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