Gene CPF_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1555 
Symbol 
ID4202279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp1776128 
End bp1776826 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content29% 
IMG OID638082433 
Producthypothetical protein 
Protein accessionYP_695998 
Protein GI110799029 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATAA CTTTTATAAG AACAGCAATA CTTTATTTCA TTGTAATTAT AAGTATTAGA 
CTTATGGGTA AACGTCAAAT TGGGGAATTG CAACCTTACG AGCTTGTAAT AACCTTAATG 
CTATCTGATT TAGCATCCTT ACCAATGCAA GATACTCGTC TTCCTCTCCT TTTAGGAATA 
GTACCTATAA TTACACTTTT ATTTGTAAAA ATATTAATAT CTGAAATCCA ACAACATAGC 
CGTTTATTTG AAAAAATCCT AGATGGTACT CCTTCCATAA TAATAAGTGA TGGAGAGATC 
AACCTAGAAA TGATGAAAAA ACAAAGGCTA ACAATGAACG ATATATTAGA AGAATTACGA 
AGCGCTGGTT ATCTAGATAT AAGCGATATT CAATATGCAA TTATAGAAAC TAATGGAACC 
ATATCAATAA TTCCTAAAAG TGCTTGTGAT AATGTTAAGA GAAAAGACTT AAAAATAAAA 
GAAAGCGAAT CAAAAATTCC AATTGTTTTA TTTGAAGATG GGCGTTTAAA TAAAAAAGCT 
CTTCAAGGAA TGAACAAGGA TGAAAAATGG TTAGATGAAA AATTAAAGTC CCTTAATTAT 
CCACCTAGAG ATAAATTATT CCTAGTTATG ATGGATTCTA ATGGGAAATT ATTTATTCAA 
AGAAAAAATC AGAAAGATAA GGAGGACATC ATACTATGA
 
Protein sequence
MLITFIRTAI LYFIVIISIR LMGKRQIGEL QPYELVITLM LSDLASLPMQ DTRLPLLLGI 
VPIITLLFVK ILISEIQQHS RLFEKILDGT PSIIISDGEI NLEMMKKQRL TMNDILEELR 
SAGYLDISDI QYAIIETNGT ISIIPKSACD NVKRKDLKIK ESESKIPIVL FEDGRLNKKA 
LQGMNKDEKW LDEKLKSLNY PPRDKLFLVM MDSNGKLFIQ RKNQKDKEDI IL