| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1546 |
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| Symbol | |
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| ID | 4203186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 1764207 |
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| End bp | 1765046 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082424 |
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| Product | patatin family phospholipase |
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| Protein accession | YP_695989 |
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| Protein GI | 110799524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00664201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAGCT TAGTTTTAGA AGGAGGAACT TTTCGTCCTA TTTTTAGTGC AGGAGTTATG
GATGCTCTTC TTGATAATAA TATAATATTT CCTTATTGTA TTGGAGTTTC AGCAGGAATA
ACTAATGGTT TTTCATATTT TTCTAATCAA AAAGGAAGAA ATATTGAAAT ATTAAAAAAA
TATAGAAATG ATAAGAGATA TTTAAGTCTT TCTAACTTCT TTAAGTGTAG AAGCATCTTT
GGTTTAGATT TTGTATTTGA TGAATTAGCA AATAAACTCT TCCCTTATGA TTTTAATGCA
CTTTCAAATT ATAAGGGAAA AGTTTTAGTA GGTGTTACAA ATGCTAATAC AGGAAAAACA
GAATACTTAG ATGGAAAAGT TAAAGATGAA AAATATATGG CTTTAAGAGC AACTTGCGCT
ATTCCTATAC TTTTCCCAGC AATAAAAATA AATGGAAATG AATATTATGA TGGTGGACTA
TTAGATCCTA TTCCAATAAA AAAAGCTATA GCAGATGGAA ATGAAAAACA CTTAATAGTT
CTTACTAGAC CTAAAAGTTA TAGAAAAACC TTAGGAAAAA GTAATAAGTT AGCATCTAAA
ATAGTGGGAC GTAAATACCC TAACTTAAAA GATACATTTT TATCAAGACA TATAAAATAT
AATGAAACAG TAAAATTTTG CGAAGAATTA GAAAAGGCTG GTAAGGCGAT TATAATAAGA
CCAAATGAAG ATGAAGCTAT TGAAAGTTTT GAAAAAGATG TAACTAAATT AGAAGAGGCT
TATAACTATG GATATAATGC CTGCATAAAA AACTTAGAAA AAATAAAGGC TTTATTTTAA
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| Protein sequence | MVSLVLEGGT FRPIFSAGVM DALLDNNIIF PYCIGVSAGI TNGFSYFSNQ KGRNIEILKK
YRNDKRYLSL SNFFKCRSIF GLDFVFDELA NKLFPYDFNA LSNYKGKVLV GVTNANTGKT
EYLDGKVKDE KYMALRATCA IPILFPAIKI NGNEYYDGGL LDPIPIKKAI ADGNEKHLIV
LTRPKSYRKT LGKSNKLASK IVGRKYPNLK DTFLSRHIKY NETVKFCEEL EKAGKAIIIR
PNEDEAIESF EKDVTKLEEA YNYGYNACIK NLEKIKALF
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