Gene CPF_1543 details

Gene Information

• Locus tag: CPF_1543
• Symbol: thiE
• ID: 4202016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 1761681
• End bp: 1762304
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638082421
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_695986
• Protein GI: 110800349
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0451009
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTAATA AAGATTACAA AAAATTATAT TTAGTAACAG ACTATAGAAT TCCCTTTAAT 
GAGCTTTTAG AAAAAACAAA GGAAGCTTTA ATTGGAGGGG TATCCATTGT TCAATATAGA 
GCAAAGAATA AAAAAACTAA AGAAATGTGT AAGGAAGCTA AGGAGTTAAA AAAGCTTTGT 
GATGAGTTTG GAGCATTATT CTTAGTAAAT GATAGAATAG ATGTAGCCTT AGCAGTAAAA 
GCTAATGGAG TTCATATAGG ACAAGATGAT ATGGAAGTTT TCATAGCAAG AGAAATAATG 
CCAAAGGATG CAGTTATAGG TGTTACTGTT CATAATAAAG AGGAAGCTTT AAAAGCTATA 
AAAGAGGGAG CAGATAACTT AGGTGTTGGA GCTTTATTTT CAACTAATAG TAAAGATGAT 
GCAACATTAA TGACCTTAGA AACCTTAAGA GAGATAAAAT CTGTTTCTAA TATTCCACTT 
TATGGAATTG GAGGTATAAC TCCTTATAAC TTAAATAAGG ATATTTTAGA AAATCTAGAT 
GGGGTAGCTG TCATATCTGC TTTGTTAAAT AGTGATAATA TAAGAGAAAA AAGTAAGGAA 
TTTTTAAATA TTCTTAGTAA ATAA 

 

Protein sequence

MINKDYKKLY LVTDYRIPFN ELLEKTKEAL IGGVSIVQYR AKNKKTKEMC KEAKELKKLC 
DEFGALFLVN DRIDVALAVK ANGVHIGQDD MEVFIAREIM PKDAVIGVTV HNKEEALKAI 
KEGADNLGVG ALFSTNSKDD ATLMTLETLR EIKSVSNIPL YGIGGITPYN LNKDILENLD 
GVAVISALLN SDNIREKSKE FLNILSK