Gene CPF_1536 details

Gene Information

• Locus tag: CPF_1536
• Symbol: pssA
• ID: 4202613
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 1753574
• End bp: 1754095
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 638082414
• Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
• Protein accession: YP_695979
• Protein GI: 110799283
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1183] Phosphatidylserine synthase
• TIGRFAM ID: [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0186042
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAAAAA GTAGTATACC AAATATATTT ACTTTTATAA ACCTATCTTT TGGTATATTA 
TCATTATTAG CAACATTTAA ATCAGAGTAT TTATTAGCAG CAATATTTAT ACTTCTTGCT 
GGATTAGTTG ATAGATATGA CGGAAGAGTT GCTCGTTATT TAAATGTTTC TAGTGATCTT 
GGTAAGGAAC TAGATTCTTT AGCGGATTTA GTATCATTTG GTGTGGCACC ATCAGTATTA 
ACTTTTGTAT TTTATAATTT TGAATCTTTA GGTCCTATGG GAATTATAGG TTATGCATTA 
TTACTTTGCT TCCCTATTTG TGGAGCTTTC AGATTAGCTA GATACAATGC AACTGAATTT 
GACGGTGTAT TTAGAGGAGT ACCTATAACT ATTGCTGGAG CTGTTGTTGC TTTATTTATT 
TTATTATCAA TAAAGTTTAC TTTAAATATT TTATTCCCAG TAGTAATTTT AGTTGTATTC 
TCTTACTTAA TGGTTAGTAA TTTACAATTA AAGAAATTTT AA 

 

Protein sequence

MRKSSIPNIF TFINLSFGIL SLLATFKSEY LLAAIFILLA GLVDRYDGRV ARYLNVSSDL 
GKELDSLADL VSFGVAPSVL TFVFYNFESL GPMGIIGYAL LLCFPICGAF RLARYNATEF 
DGVFRGVPIT IAGAVVALFI LLSIKFTLNI LFPVVILVVF SYLMVSNLQL KKF